Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.14□□□□□ -1.43
CTR9Q6PD62 AC138409.2-202ENST00000507274 458 ntBASIC6.14□□□□□ -1.43
CTR9Q6PD62 RN7SKP147-201ENST00000517154 244 ntBASIC6.14□□□□□ -1.43
CTR9Q6PD62 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC6.14□□□□□ -1.43
CTR9Q6PD62 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CTR9Q6PD62 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.14□□□□□ -1.43
CTR9Q6PD62 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.14□□□□□ -1.43
CTR9Q6PD62 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CTR9Q6PD62 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.14□□□□□ -1.43
CTR9Q6PD62 AL627230.1-201ENST00000613077 211 ntBASIC6.14□□□□□ -1.43
CTR9Q6PD62 AL591926.8-201ENST00000616876 211 ntBASIC6.14□□□□□ -1.43
CTR9Q6PD62 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.14□□□□□ -1.43
CTR9Q6PD62 DDX18P6-201ENST00000450119 1997 ntBASIC6.14□□□□□ -1.43
CTR9Q6PD62 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CTR9Q6PD62 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CTR9Q6PD62 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CTR9Q6PD62 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.14□□□□□ -1.43
CTR9Q6PD62 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.14□□□□□ -1.43
CTR9Q6PD62 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CTR9Q6PD62 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CTR9Q6PD62 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
CTR9Q6PD62 OR4G1P-202ENST00000641173 1788 ntBASIC6.13□□□□□ -1.43
CTR9Q6PD62 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CTR9Q6PD62 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.13□□□□□ -1.43
CTR9Q6PD62 SMG1P4-204ENST00000523028 4131 ntBASIC6.13□□□□□ -1.43
CTR9Q6PD62 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.13□□□□□ -1.43
CTR9Q6PD62 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CTR9Q6PD62 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CTR9Q6PD62 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CTR9Q6PD62 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.13□□□□□ -1.43
CTR9Q6PD62 AL035696.2-201ENST00000407941 709 ntBASIC6.13□□□□□ -1.43
CTR9Q6PD62 RN7SKP114-201ENST00000410327 279 ntBASIC6.13□□□□□ -1.43
CTR9Q6PD62 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.13□□□□□ -1.43
CTR9Q6PD62 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CTR9Q6PD62 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CTR9Q6PD62 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.13□□□□□ -1.43
CTR9Q6PD62 RHOT1P3-201ENST00000436571 331 ntBASIC6.13□□□□□ -1.43
CTR9Q6PD62 AC092647.3-201ENST00000443044 633 ntBASIC6.13□□□□□ -1.43
CTR9Q6PD62 KNOP1P3-201ENST00000446933 426 ntBASIC6.13□□□□□ -1.43
CTR9Q6PD62 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC6.13□□□□□ -1.43
CTR9Q6PD62 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.13□□□□□ -1.43
CTR9Q6PD62 AC020779.1-201ENST00000478757 796 ntBASIC6.13□□□□□ -1.43
CTR9Q6PD62 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.13□□□□□ -1.43
CTR9Q6PD62 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.13□□□□□ -1.43
CTR9Q6PD62 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.13□□□□□ -1.43
CTR9Q6PD62 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.13□□□□□ -1.43
CTR9Q6PD62 AC093799.2-201ENST00000610062 578 ntBASIC6.13□□□□□ -1.43
CTR9Q6PD62 BTBD10P1-201ENST00000549824 1352 ntBASIC6.13□□□□□ -1.43
CTR9Q6PD62 RBPJP2-201ENST00000618187 1444 ntBASIC6.13□□□□□ -1.43
CTR9Q6PD62 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CTR9Q6PD62 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CTR9Q6PD62 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CTR9Q6PD62 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CTR9Q6PD62 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CTR9Q6PD62 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CTR9Q6PD62 CDY11P-201ENST00000447168 1651 ntBASIC6.13□□□□□ -1.43
CTR9Q6PD62 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CTR9Q6PD62 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CTR9Q6PD62 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
CTR9Q6PD62 AC083843.3-201ENST00000623679 2186 ntBASIC6.13□□□□□ -1.43
CTR9Q6PD62 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CTR9Q6PD62 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.13□□□□□ -1.43
CTR9Q6PD62 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CTR9Q6PD62 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
CTR9Q6PD62 RNU6-167P-201ENST00000384292 106 ntBASIC6.12□□□□□ -1.43
CTR9Q6PD62 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CTR9Q6PD62 RNA5SP241-201ENST00000391326 114 ntBASIC6.12□□□□□ -1.43
CTR9Q6PD62 AL589647.1-201ENST00000402485 466 ntBASIC6.12□□□□□ -1.43
CTR9Q6PD62 SETP10-201ENST00000424368 814 ntBASIC6.12□□□□□ -1.43
CTR9Q6PD62 CDC27P2-201ENST00000425026 1922 ntBASIC6.12□□□□□ -1.43
CTR9Q6PD62 AL590762.4-201ENST00000425885 253 ntBASIC6.12□□□□□ -1.43
CTR9Q6PD62 AC006455.6-201ENST00000426192 893 ntBASIC6.12□□□□□ -1.43
CTR9Q6PD62 HSPD1P12-201ENST00000429127 1069 ntBASIC6.12□□□□□ -1.43
CTR9Q6PD62 RPL34P6-201ENST00000432390 345 ntBASIC6.12□□□□□ -1.43
CTR9Q6PD62 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.12□□□□□ -1.43
CTR9Q6PD62 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.12□□□□□ -1.43
CTR9Q6PD62 AC090018.1-201ENST00000434369 367 ntBASIC6.12□□□□□ -1.43
CTR9Q6PD62 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.12□□□□□ -1.43
CTR9Q6PD62 RPL12P3-201ENST00000440080 396 ntBASIC6.12□□□□□ -1.43
CTR9Q6PD62 RPL34P20-201ENST00000442771 351 ntBASIC6.12□□□□□ -1.43
CTR9Q6PD62 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.12□□□□□ -1.43
CTR9Q6PD62 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CTR9Q6PD62 RN7SL97P-201ENST00000486780 299 ntBASIC6.12□□□□□ -1.43
CTR9Q6PD62 HMGN2P25-201ENST00000486956 268 ntBASIC6.12□□□□□ -1.43
CTR9Q6PD62 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.12□□□□□ -1.43
CTR9Q6PD62 AC093890.1-201ENST00000502554 540 ntBASIC6.12□□□□□ -1.43
CTR9Q6PD62 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.12□□□□□ -1.43
CTR9Q6PD62 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
CTR9Q6PD62 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.12□□□□□ -1.43
CTR9Q6PD62 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.12□□□□□ -1.43
CTR9Q6PD62 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.12□□□□□ -1.43
CTR9Q6PD62 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.12□□□□□ -1.43
CTR9Q6PD62 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.12□□□□□ -1.43
CTR9Q6PD62 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC6.12□□□□□ -1.43
CTR9Q6PD62 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CTR9Q6PD62 AC026523.2-201ENST00000625039 7739 ntBASIC6.12□□□□□ -1.43
CTR9Q6PD62 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CTR9Q6PD62 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
CTR9Q6PD62 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CTR9Q6PD62 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms