Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PKNOX1P55347 AC235565.1-201ENST00000456962 1325 ntBASIC4.95□□□□□ -1.62
PKNOX1P55347 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PKNOX1P55347 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
PKNOX1P55347 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PKNOX1P55347 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
PKNOX1P55347 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PKNOX1P55347 MTCO1P15-201ENST00000529569 1526 ntBASIC4.94□□□□□ -1.62
PKNOX1P55347 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PKNOX1P55347 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
PKNOX1P55347 AC245100.2-201ENST00000454544 1679 ntBASIC4.94□□□□□ -1.62
PKNOX1P55347 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PKNOX1P55347 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
PKNOX1P55347 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PKNOX1P55347 MIR600-201ENST00000385007 98 ntBASIC4.94□□□□□ -1.62
PKNOX1P55347 AL359643.1-201ENST00000404109 423 ntBASIC4.94□□□□□ -1.62
PKNOX1P55347 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.94□□□□□ -1.62
PKNOX1P55347 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.94□□□□□ -1.62
PKNOX1P55347 SETP10-201ENST00000424368 814 ntBASIC4.94□□□□□ -1.62
PKNOX1P55347 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.94□□□□□ -1.62
PKNOX1P55347 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PKNOX1P55347 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.94□□□□□ -1.62
PKNOX1P55347 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.94□□□□□ -1.62
PKNOX1P55347 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.94□□□□□ -1.62
PKNOX1P55347 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.94□□□□□ -1.62
PKNOX1P55347 MTCO3P17-201ENST00000443775 513 ntBASIC4.94□□□□□ -1.62
PKNOX1P55347 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.94□□□□□ -1.62
PKNOX1P55347 AL591623.2-201ENST00000449978 222 ntBASIC4.94□□□□□ -1.62
PKNOX1P55347 AC093166.2-201ENST00000455969 1017 ntBASIC4.94□□□□□ -1.62
PKNOX1P55347 GYG1P1-201ENST00000460864 698 ntBASIC4.94□□□□□ -1.62
PKNOX1P55347 RN7SL184P-201ENST00000488308 297 ntBASIC4.94□□□□□ -1.62
PKNOX1P55347 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.94□□□□□ -1.62
PKNOX1P55347 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.94□□□□□ -1.62
PKNOX1P55347 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC4.94□□□□□ -1.62
PKNOX1P55347 EIF4A2P5-201ENST00000529914 499 ntBASIC4.94□□□□□ -1.62
PKNOX1P55347 AC134349.2-201ENST00000535136 910 ntBASIC4.94□□□□□ -1.62
PKNOX1P55347 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.94□□□□□ -1.62
PKNOX1P55347 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.94□□□□□ -1.62
PKNOX1P55347 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.94□□□□□ -1.62
PKNOX1P55347 RPSAP73-201ENST00000614820 330 ntBASIC4.94□□□□□ -1.62
PKNOX1P55347 AC007204.2-201ENST00000615022 616 ntBASIC4.94□□□□□ -1.62
PKNOX1P55347 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PKNOX1P55347 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PKNOX1P55347 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.94□□□□□ -1.62
PKNOX1P55347 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.94□□□□□ -1.62
PKNOX1P55347 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
PKNOX1P55347 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
PKNOX1P55347 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PKNOX1P55347 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PKNOX1P55347 AC083843.2-201ENST00000568248 6253 ntBASIC4.94□□□□□ -1.62
PKNOX1P55347 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PKNOX1P55347 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
PKNOX1P55347 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
PKNOX1P55347 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PKNOX1P55347 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.93□□□□□ -1.62
PKNOX1P55347 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PKNOX1P55347 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
PKNOX1P55347 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.93□□□□□ -1.62
PKNOX1P55347 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PKNOX1P55347 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PKNOX1P55347 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.93□□□□□ -1.62
PKNOX1P55347 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PKNOX1P55347 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PKNOX1P55347 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PKNOX1P55347 RNA5SP183-201ENST00000362452 119 ntBASIC4.93□□□□□ -1.62
PKNOX1P55347 RNU4-44P-201ENST00000363050 141 ntBASIC4.93□□□□□ -1.62
PKNOX1P55347 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.93□□□□□ -1.62
PKNOX1P55347 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.93□□□□□ -1.62
PKNOX1P55347 AC005522.1-201ENST00000395416 346 ntBASIC4.93□□□□□ -1.62
PKNOX1P55347 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.93□□□□□ -1.62
PKNOX1P55347 AC108075.1-201ENST00000424692 529 ntBASIC4.93□□□□□ -1.62
PKNOX1P55347 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.93□□□□□ -1.62
PKNOX1P55347 RPS26P4-201ENST00000431743 355 ntBASIC4.93□□□□□ -1.62
PKNOX1P55347 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.93□□□□□ -1.62
PKNOX1P55347 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.93□□□□□ -1.62
PKNOX1P55347 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.93□□□□□ -1.62
PKNOX1P55347 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.93□□□□□ -1.62
PKNOX1P55347 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.93□□□□□ -1.62
PKNOX1P55347 AC007386.1-201ENST00000455212 582 ntBASIC4.93□□□□□ -1.62
PKNOX1P55347 SIAH1P1-201ENST00000479411 923 ntBASIC4.93□□□□□ -1.62
PKNOX1P55347 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.93□□□□□ -1.62
PKNOX1P55347 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.93□□□□□ -1.62
PKNOX1P55347 AC093890.1-201ENST00000502554 540 ntBASIC4.93□□□□□ -1.62
PKNOX1P55347 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.93□□□□□ -1.62
PKNOX1P55347 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.93□□□□□ -1.62
PKNOX1P55347 RFPL4AP3-201ENST00000515267 345 ntBASIC4.93□□□□□ -1.62
PKNOX1P55347 HNRNPRP2-201ENST00000528421 743 ntBASIC4.93□□□□□ -1.62
PKNOX1P55347 AC024940.3-201ENST00000538551 316 ntBASIC4.93□□□□□ -1.62
PKNOX1P55347 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.93□□□□□ -1.62
PKNOX1P55347 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.93□□□□□ -1.62
PKNOX1P55347 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.93□□□□□ -1.62
PKNOX1P55347 AC096586.2-201ENST00000610260 441 ntBASIC4.93□□□□□ -1.62
PKNOX1P55347 AL359513.1-201ENST00000614364 557 ntBASIC4.93□□□□□ -1.62
PKNOX1P55347 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.93□□□□□ -1.62
PKNOX1P55347 OR8G7P-201ENST00000616658 848 ntBASIC4.93□□□□□ -1.62
PKNOX1P55347 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.93□□□□□ -1.62
PKNOX1P55347 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.93□□□□□ -1.62
PKNOX1P55347 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.93□□□□□ -1.62
PKNOX1P55347 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PKNOX1P55347 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms