Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RFPL4AP3-201ENST00000515267 345 ntBASIC4.95□□□□□ -1.62
CDH11P55287 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH11P55287 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.95□□□□□ -1.62
CDH11P55287 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH11P55287 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH11P55287 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH11P55287 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH11P55287 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH11P55287 DPPA2P4-201ENST00000563717 878 ntBASIC4.95□□□□□ -1.62
CDH11P55287 AC106730.2-201ENST00000566641 540 ntBASIC4.95□□□□□ -1.62
CDH11P55287 RBM22P12-201ENST00000567098 1255 ntBASIC4.95□□□□□ -1.62
CDH11P55287 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.95□□□□□ -1.62
CDH11P55287 AC007448.1-201ENST00000582714 234 ntBASIC4.95□□□□□ -1.62
CDH11P55287 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH11P55287 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH11P55287 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDH11P55287 QTRT1P1-201ENST00000604344 1078 ntBASIC4.95□□□□□ -1.62
CDH11P55287 BNIP3P19-201ENST00000605397 577 ntBASIC4.95□□□□□ -1.62
CDH11P55287 PPATP2-201ENST00000605635 508 ntBASIC4.95□□□□□ -1.62
CDH11P55287 AC067838.1-201ENST00000606064 577 ntBASIC4.95□□□□□ -1.62
CDH11P55287 RNU6-84P-201ENST00000607737 102 ntBASIC4.95□□□□□ -1.62
CDH11P55287 AP000864.1-201ENST00000609424 650 ntBASIC4.95□□□□□ -1.62
CDH11P55287 AL512624.1-201ENST00000613638 469 ntBASIC4.95□□□□□ -1.62
CDH11P55287 AL445493.3-201ENST00000619568 477 ntBASIC4.95□□□□□ -1.62
CDH11P55287 CU639417.4-201ENST00000623928 207 ntBASIC4.95□□□□□ -1.62
CDH11P55287 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH11P55287 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH11P55287 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH11P55287 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
CDH11P55287 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDH11P55287 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH11P55287 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDH11P55287 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH11P55287 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.95□□□□□ -1.62
CDH11P55287 AC104623.2-202ENST00000623477 4002 ntBASIC4.95□□□□□ -1.62
CDH11P55287 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CDH11P55287 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CDH11P55287 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.95□□□□□ -1.62
CDH11P55287 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CDH11P55287 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CDH11P55287 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.95□□□□□ -1.62
CDH11P55287 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
CDH11P55287 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CDH11P55287 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH11P55287 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH11P55287 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.94□□□□□ -1.62
CDH11P55287 SRRM1P3-201ENST00000426911 2678 ntBASIC4.94□□□□□ -1.62
CDH11P55287 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH11P55287 ADAM5-202ENST00000399789 1942 ntBASIC4.94□□□□□ -1.62
CDH11P55287 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH11P55287 RN7SKP160-201ENST00000363804 340 ntBASIC4.94□□□□□ -1.62
CDH11P55287 RNA5SP132-201ENST00000364725 118 ntBASIC4.94□□□□□ -1.62
CDH11P55287 SNORD115-48-201ENST00000364764 76 ntBASIC4.94□□□□□ -1.62
CDH11P55287 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CDH11P55287 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.94□□□□□ -1.62
CDH11P55287 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.94□□□□□ -1.62
CDH11P55287 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH11P55287 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH11P55287 AL391361.1-201ENST00000405580 489 ntBASIC4.94□□□□□ -1.62
CDH11P55287 AL445213.1-201ENST00000412589 747 ntBASIC4.94□□□□□ -1.62
CDH11P55287 AL596448.1-201ENST00000415024 392 ntBASIC4.94□□□□□ -1.62
CDH11P55287 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.94□□□□□ -1.62
CDH11P55287 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH11P55287 HSPD1P12-201ENST00000429127 1069 ntBASIC4.94□□□□□ -1.62
CDH11P55287 HSFY7P-201ENST00000432672 318 ntBASIC4.94□□□□□ -1.62
CDH11P55287 AL606490.7-201ENST00000433136 191 ntBASIC4.94□□□□□ -1.62
CDH11P55287 AC007563.3-201ENST00000433233 371 ntBASIC4.94□□□□□ -1.62
CDH11P55287 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.94□□□□□ -1.62
CDH11P55287 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDH11P55287 HSFY8P-201ENST00000437934 318 ntBASIC4.94□□□□□ -1.62
CDH11P55287 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH11P55287 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.94□□□□□ -1.62
CDH11P55287 TCEA1P3-201ENST00000443005 880 ntBASIC4.94□□□□□ -1.62
CDH11P55287 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH11P55287 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDH11P55287 AL157884.3-201ENST00000448273 1184 ntBASIC4.94□□□□□ -1.62
CDH11P55287 AC090804.1-201ENST00000448870 490 ntBASIC4.94□□□□□ -1.62
CDH11P55287 HSFY5P-201ENST00000453726 309 ntBASIC4.94□□□□□ -1.62
CDH11P55287 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
CDH11P55287 RPS26P39-201ENST00000469206 341 ntBASIC4.94□□□□□ -1.62
CDH11P55287 RPS3AP15-201ENST00000483874 781 ntBASIC4.94□□□□□ -1.62
CDH11P55287 COX6B1P2-201ENST00000489624 230 ntBASIC4.94□□□□□ -1.62
CDH11P55287 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH11P55287 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH11P55287 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.94□□□□□ -1.62
CDH11P55287 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH11P55287 MRPS16P1-201ENST00000523462 412 ntBASIC4.94□□□□□ -1.62
CDH11P55287 MTND5P21-201ENST00000531961 522 ntBASIC4.94□□□□□ -1.62
CDH11P55287 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
CDH11P55287 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH11P55287 AC106785.3-201ENST00000564064 847 ntBASIC4.94□□□□□ -1.62
CDH11P55287 MTCYBP13-201ENST00000578634 1093 ntBASIC4.94□□□□□ -1.62
CDH11P55287 MIR4489-201ENST00000578869 62 ntBASIC4.94□□□□□ -1.62
CDH11P55287 AC127024.5-201ENST00000580085 462 ntBASIC4.94□□□□□ -1.62
CDH11P55287 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.94□□□□□ -1.62
CDH11P55287 PRPF19P1-201ENST00000584766 898 ntBASIC4.94□□□□□ -1.62
CDH11P55287 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.94□□□□□ -1.62
CDH11P55287 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH11P55287 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.94□□□□□ -1.62
CDH11P55287 AC063977.5-201ENST00000601044 974 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms