Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.72□□□□□ -1.49
CLCN3P51790 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.72□□□□□ -1.49
CLCN3P51790 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.72□□□□□ -1.49
CLCN3P51790 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.72□□□□□ -1.49
CLCN3P51790 AL356490.1-201ENST00000623079 479 ntBASIC5.72□□□□□ -1.49
CLCN3P51790 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.72□□□□□ -1.49
CLCN3P51790 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
CLCN3P51790 DDX18P6-201ENST00000450119 1997 ntBASIC5.72□□□□□ -1.49
CLCN3P51790 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLCN3P51790 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLCN3P51790 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLCN3P51790 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.72□□□□□ -1.49
CLCN3P51790 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
CLCN3P51790 AL355488.2-201ENST00000609909 2850 ntBASIC5.72□□□□□ -1.49
CLCN3P51790 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CLCN3P51790 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CLCN3P51790 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CLCN3P51790 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CLCN3P51790 AP002512.4-202ENST00000641599 4530 ntBASIC5.71□□□□□ -1.5
CLCN3P51790 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLCN3P51790 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLCN3P51790 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CLCN3P51790 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLCN3P51790 RNU4-39P-201ENST00000362455 127 ntBASIC5.71□□□□□ -1.5
CLCN3P51790 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLCN3P51790 SNORA51.8-201ENST00000384234 132 ntBASIC5.71□□□□□ -1.5
CLCN3P51790 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLCN3P51790 AL133270.1-201ENST00000402635 279 ntBASIC5.71□□□□□ -1.5
CLCN3P51790 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.71□□□□□ -1.5
CLCN3P51790 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.71□□□□□ -1.5
CLCN3P51790 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.71□□□□□ -1.5
CLCN3P51790 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.71□□□□□ -1.5
CLCN3P51790 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.71□□□□□ -1.5
CLCN3P51790 HIGD1AP8-201ENST00000453927 274 ntBASIC5.71□□□□□ -1.5
CLCN3P51790 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.71□□□□□ -1.5
CLCN3P51790 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.71□□□□□ -1.5
CLCN3P51790 AC022133.1-201ENST00000490961 571 ntBASIC5.71□□□□□ -1.5
CLCN3P51790 SEPT10P1-201ENST00000517342 1162 ntBASIC5.71□□□□□ -1.5
CLCN3P51790 AP001922.4-201ENST00000526967 290 ntBASIC5.71□□□□□ -1.5
CLCN3P51790 OR5D15P-201ENST00000531671 942 ntBASIC5.71□□□□□ -1.5
CLCN3P51790 LINC00557-201ENST00000563184 1279 ntBASIC5.71□□□□□ -1.5
CLCN3P51790 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CLCN3P51790 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
CLCN3P51790 AC005972.3-201ENST00000606304 481 ntBASIC5.71□□□□□ -1.5
CLCN3P51790 RNU6-84P-201ENST00000607737 102 ntBASIC5.71□□□□□ -1.5
CLCN3P51790 OR51C1P-201ENST00000608504 942 ntBASIC5.71□□□□□ -1.5
CLCN3P51790 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.71□□□□□ -1.5
CLCN3P51790 AC116651.1-201ENST00000609724 556 ntBASIC5.71□□□□□ -1.5
CLCN3P51790 AC092574.1-201ENST00000609771 420 ntBASIC5.71□□□□□ -1.5
CLCN3P51790 AL049539.1-201ENST00000611964 459 ntBASIC5.71□□□□□ -1.5
CLCN3P51790 AL353662.3-201ENST00000625131 237 ntBASIC5.71□□□□□ -1.5
CLCN3P51790 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLCN3P51790 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLCN3P51790 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLCN3P51790 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.71□□□□□ -1.5
CLCN3P51790 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.71□□□□□ -1.5
CLCN3P51790 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
CLCN3P51790 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CLCN3P51790 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.71□□□□□ -1.5
CLCN3P51790 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLCN3P51790 NLRP3P1-201ENST00000622303 1785 ntBASIC5.7□□□□□ -1.5
CLCN3P51790 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLCN3P51790 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.7□□□□□ -1.5
CLCN3P51790 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLCN3P51790 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLCN3P51790 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.7□□□□□ -1.5
CLCN3P51790 RN7SKP145-201ENST00000363291 303 ntBASIC5.7□□□□□ -1.5
CLCN3P51790 SNORA27.3-201ENST00000364937 134 ntBASIC5.7□□□□□ -1.5
CLCN3P51790 RN7SKP153-201ENST00000365026 316 ntBASIC5.7□□□□□ -1.5
CLCN3P51790 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.7□□□□□ -1.5
CLCN3P51790 DDX39BP1-205ENST00000422507 192 ntBASIC5.7□□□□□ -1.5
CLCN3P51790 AC009784.1-201ENST00000426484 460 ntBASIC5.7□□□□□ -1.5
CLCN3P51790 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.7□□□□□ -1.5
CLCN3P51790 AC090018.1-201ENST00000434369 367 ntBASIC5.7□□□□□ -1.5
CLCN3P51790 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.7□□□□□ -1.5
CLCN3P51790 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.7□□□□□ -1.5
CLCN3P51790 AC023271.1-201ENST00000445936 1090 ntBASIC5.7□□□□□ -1.5
CLCN3P51790 REG1CP-206ENST00000447469 496 ntBASIC5.7□□□□□ -1.5
CLCN3P51790 TRY2P-201ENST00000448860 689 ntBASIC5.7□□□□□ -1.5
CLCN3P51790 AC091685.2-201ENST00000454924 864 ntBASIC5.7□□□□□ -1.5
CLCN3P51790 RN7SL197P-201ENST00000466981 299 ntBASIC5.7□□□□□ -1.5
CLCN3P51790 AC020779.1-201ENST00000478757 796 ntBASIC5.7□□□□□ -1.5
CLCN3P51790 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.7□□□□□ -1.5
CLCN3P51790 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.7□□□□□ -1.5
CLCN3P51790 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.7□□□□□ -1.5
CLCN3P51790 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.7□□□□□ -1.5
CLCN3P51790 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.7□□□□□ -1.5
CLCN3P51790 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.7□□□□□ -1.5
CLCN3P51790 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.7□□□□□ -1.5
CLCN3P51790 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.7□□□□□ -1.5
CLCN3P51790 EIF3FP1-201ENST00000613970 806 ntBASIC5.7□□□□□ -1.5
CLCN3P51790 AP001784.1-201ENST00000624107 428 ntBASIC5.7□□□□□ -1.5
CLCN3P51790 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.7□□□□□ -1.5
CLCN3P51790 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CLCN3P51790 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLCN3P51790 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLCN3P51790 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CLCN3P51790 AC092111.2-201ENST00000611627 1414 ntBASIC5.7□□□□□ -1.5
CLCN3P51790 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.7□□□□□ -1.5
CLCN3P51790 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms