Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 AC092868.3-201ENST00000560515 784 ntBASIC5.36□□□□□ -1.55
HLA-DPA1P20036 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 AC009597.2-201ENST00000604659 592 ntBASIC5.36□□□□□ -1.55
HLA-DPA1P20036 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
HLA-DPA1P20036 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 MTCO1P8-201ENST00000416914 1523 ntBASIC5.35□□□□□ -1.55
HLA-DPA1P20036 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 OR4K12P-201ENST00000406538 961 ntBASIC5.35□□□□□ -1.55
HLA-DPA1P20036 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 AC079809.1-201ENST00000415468 276 ntBASIC5.35□□□□□ -1.55
HLA-DPA1P20036 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 RPL12P18-201ENST00000437175 325 ntBASIC5.35□□□□□ -1.55
HLA-DPA1P20036 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 FHP1-201ENST00000442741 703 ntBASIC5.35□□□□□ -1.55
HLA-DPA1P20036 GAPDHP14-201ENST00000450472 937 ntBASIC5.35□□□□□ -1.55
HLA-DPA1P20036 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 AC104634.1-201ENST00000452720 462 ntBASIC5.35□□□□□ -1.55
HLA-DPA1P20036 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 AL671862.1-201ENST00000515851 349 ntBASIC5.35□□□□□ -1.55
HLA-DPA1P20036 AC092709.1-201ENST00000521355 1045 ntBASIC5.35□□□□□ -1.55
HLA-DPA1P20036 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 AC126177.5-201ENST00000549599 178 ntBASIC5.35□□□□□ -1.55
HLA-DPA1P20036 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 NMNAT1P5-201ENST00000559657 841 ntBASIC5.35□□□□□ -1.55
HLA-DPA1P20036 RPL10P14-201ENST00000565265 298 ntBASIC5.35□□□□□ -1.55
HLA-DPA1P20036 MIR3176-201ENST00000582210 90 ntBASIC5.35□□□□□ -1.55
HLA-DPA1P20036 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HLA-DPA1P20036 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 AC023421.1-201ENST00000590535 1785 ntBASIC5.34□□□□□ -1.55
HLA-DPA1P20036 AC109446.4-201ENST00000623235 2755 ntBASIC5.34□□□□□ -1.55
HLA-DPA1P20036 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 SOCS5P3-201ENST00000425115 1576 ntBASIC5.34□□□□□ -1.55
HLA-DPA1P20036 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 MIR133A2-201ENST00000347538 102 ntBASIC5.34□□□□□ -1.55
HLA-DPA1P20036 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 AC005294.1-201ENST00000355509 281 ntBASIC5.34□□□□□ -1.55
HLA-DPA1P20036 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 MIR105-1-201ENST00000385222 81 ntBASIC5.34□□□□□ -1.55
HLA-DPA1P20036 RNU1-149P-201ENST00000390870 161 ntBASIC5.34□□□□□ -1.55
HLA-DPA1P20036 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 OR5M12P-201ENST00000423388 929 ntBASIC5.34□□□□□ -1.55
HLA-DPA1P20036 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 FAM96AP1-201ENST00000430879 482 ntBASIC5.34□□□□□ -1.55
HLA-DPA1P20036 AC046176.1-201ENST00000435260 1170 ntBASIC5.34□□□□□ -1.55
HLA-DPA1P20036 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 RPL5P13-201ENST00000462840 709 ntBASIC5.34□□□□□ -1.55
HLA-DPA1P20036 RPL7P6-201ENST00000480903 738 ntBASIC5.34□□□□□ -1.55
HLA-DPA1P20036 RPL7P41-201ENST00000485823 957 ntBASIC5.34□□□□□ -1.55
HLA-DPA1P20036 RPL15P21-201ENST00000495592 567 ntBASIC5.34□□□□□ -1.55
HLA-DPA1P20036 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.34□□□□□ -1.55
HLA-DPA1P20036 AC027216.1-201ENST00000577726 685 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms