Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.71□□□□□ -1.5
RB1P06400 AP002345.1-201ENST00000456493 928 ntBASIC5.71□□□□□ -1.5
RB1P06400 RN7SL205P-201ENST00000490174 284 ntBASIC5.71□□□□□ -1.5
RB1P06400 RN7SL346P-201ENST00000491561 294 ntBASIC5.71□□□□□ -1.5
RB1P06400 AC109464.1-201ENST00000511091 819 ntBASIC5.71□□□□□ -1.5
RB1P06400 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.71□□□□□ -1.5
RB1P06400 OR5AM1P-201ENST00000532136 1032 ntBASIC5.71□□□□□ -1.5
RB1P06400 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RB1P06400 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.71□□□□□ -1.5
RB1P06400 RN7SL52P-201ENST00000584271 284 ntBASIC5.71□□□□□ -1.5
RB1P06400 MIMT1-201ENST00000597105 1050 ntBASIC5.71□□□□□ -1.5
RB1P06400 AL022394.1-201ENST00000606979 292 ntBASIC5.71□□□□□ -1.5
RB1P06400 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.71□□□□□ -1.5
RB1P06400 AC073575.2-201ENST00000614212 627 ntBASIC5.71□□□□□ -1.5
RB1P06400 RN7SL722P-201ENST00000617780 284 ntBASIC5.71□□□□□ -1.5
RB1P06400 RN7SL565P-201ENST00000618246 284 ntBASIC5.71□□□□□ -1.5
RB1P06400 AL133370.2-201ENST00000619934 439 ntBASIC5.71□□□□□ -1.5
RB1P06400 AC099654.6-201ENST00000636487 512 ntBASIC5.71□□□□□ -1.5
RB1P06400 AC004656.1-201ENST00000568479 4951 ntBASIC5.71□□□□□ -1.5
RB1P06400 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.71□□□□□ -1.5
RB1P06400 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.71□□□□□ -1.5
RB1P06400 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RB1P06400 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RB1P06400 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.71□□□□□ -1.5
RB1P06400 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RB1P06400 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RB1P06400 AC006484.1-201ENST00000435086 1884 ntBASIC5.71□□□□□ -1.5
RB1P06400 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.7□□□□□ -1.5
RB1P06400 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.7□□□□□ -1.5
RB1P06400 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RB1P06400 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RB1P06400 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RB1P06400 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.7□□□□□ -1.5
RB1P06400 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RB1P06400 RNA5SP326-201ENST00000363209 110 ntBASIC5.7□□□□□ -1.5
RB1P06400 RNVU1-6-201ENST00000364688 164 ntBASIC5.7□□□□□ -1.5
RB1P06400 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RB1P06400 MIR105-1-201ENST00000385222 81 ntBASIC5.7□□□□□ -1.5
RB1P06400 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.7□□□□□ -1.5
RB1P06400 COX6B1P1-201ENST00000415962 213 ntBASIC5.7□□□□□ -1.5
RB1P06400 AL590139.1-201ENST00000416267 400 ntBASIC5.7□□□□□ -1.5
RB1P06400 DDX39BP1-205ENST00000422507 192 ntBASIC5.7□□□□□ -1.5
RB1P06400 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.7□□□□□ -1.5
RB1P06400 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.7□□□□□ -1.5
RB1P06400 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.7□□□□□ -1.5
RB1P06400 AL138878.2-201ENST00000440581 1241 ntBASIC5.7□□□□□ -1.5
RB1P06400 AC017099.1-201ENST00000448261 1028 ntBASIC5.7□□□□□ -1.5
RB1P06400 MTND5P8-201ENST00000449817 1083 ntBASIC5.7□□□□□ -1.5
RB1P06400 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.7□□□□□ -1.5
RB1P06400 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.7□□□□□ -1.5
RB1P06400 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.7□□□□□ -1.5
RB1P06400 RPL37AP8-201ENST00000494116 276 ntBASIC5.7□□□□□ -1.5
RB1P06400 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.7□□□□□ -1.5
RB1P06400 FABP5P6-201ENST00000510588 409 ntBASIC5.7□□□□□ -1.5
RB1P06400 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.7□□□□□ -1.5
RB1P06400 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.7□□□□□ -1.5
RB1P06400 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.7□□□□□ -1.5
RB1P06400 AC008033.2-201ENST00000542626 177 ntBASIC5.7□□□□□ -1.5
RB1P06400 BNIP3P1-201ENST00000547295 580 ntBASIC5.7□□□□□ -1.5
RB1P06400 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.7□□□□□ -1.5
RB1P06400 DUX4L52-201ENST00000549363 777 ntBASIC5.7□□□□□ -1.5
RB1P06400 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.7□□□□□ -1.5
RB1P06400 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.7□□□□□ -1.5
RB1P06400 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.7□□□□□ -1.5
RB1P06400 AC005252.1-201ENST00000604518 1063 ntBASIC5.7□□□□□ -1.5
RB1P06400 AL451049.1-201ENST00000608672 497 ntBASIC5.7□□□□□ -1.5
RB1P06400 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RB1P06400 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
RB1P06400 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RB1P06400 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RB1P06400 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RB1P06400 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.7□□□□□ -1.5
RB1P06400 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.7□□□□□ -1.5
RB1P06400 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RB1P06400 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
RB1P06400 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RB1P06400 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RB1P06400 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RB1P06400 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RB1P06400 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
RB1P06400 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RB1P06400 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RB1P06400 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RB1P06400 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RB1P06400 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RB1P06400 AC144833.1-201ENST00000567953 4089 ntBASIC5.69□□□□□ -1.5
RB1P06400 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RB1P06400 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RB1P06400 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
RB1P06400 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RB1P06400 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
RB1P06400 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RB1P06400 AL355834.1-201ENST00000556602 3965 ntBASIC5.69□□□□□ -1.5
RB1P06400 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RB1P06400 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.69□□□□□ -1.5
RB1P06400 CCNB2P1-201ENST00000399411 1150 ntBASIC5.69□□□□□ -1.5
RB1P06400 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.69□□□□□ -1.5
RB1P06400 GJA6P-201ENST00000415117 1042 ntBASIC5.69□□□□□ -1.5
RB1P06400 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.69□□□□□ -1.5
RB1P06400 snoU13.20-201ENST00000459180 104 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms