Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
SMAD6O43541 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.46□□□□□ -1.54
SMAD6O43541 CR383656.5-201ENST00000547616 1340 ntBASIC5.46□□□□□ -1.54
SMAD6O43541 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SMAD6O43541 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SMAD6O43541 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SMAD6O43541 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SMAD6O43541 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SMAD6O43541 AC011493.1-201ENST00000596753 1632 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 AL606537.1-201ENST00000607258 2011 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SMAD6O43541 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
SMAD6O43541 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
SMAD6O43541 AC027228.2-201ENST00000567141 2154 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.45□□□□□ -1.54
SMAD6O43541 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SMAD6O43541 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.45□□□□□ -1.54
SMAD6O43541 RN7SKP185-201ENST00000362813 326 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 RNU6-729P-201ENST00000384399 107 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 AL035405.1-201ENST00000400795 710 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 MTND4P13-201ENST00000402078 1023 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 PPIAP9-201ENST00000403866 498 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.45□□□□□ -1.54
SMAD6O43541 AC108075.1-201ENST00000424692 529 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.45□□□□□ -1.54
SMAD6O43541 AL139148.1-201ENST00000427122 680 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 CETN4P-201ENST00000432407 469 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.45□□□□□ -1.54
SMAD6O43541 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.45□□□□□ -1.54
SMAD6O43541 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.45□□□□□ -1.54
SMAD6O43541 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.45□□□□□ -1.54
SMAD6O43541 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SMAD6O43541 RPL7P6-201ENST00000480903 738 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 AC079841.1-201ENST00000481228 950 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 OR11I1P-201ENST00000486033 954 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 OR9N1P-201ENST00000491296 333 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 AC015864.1-201ENST00000496512 544 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.45□□□□□ -1.54
SMAD6O43541 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.45□□□□□ -1.54
SMAD6O43541 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.45□□□□□ -1.54
SMAD6O43541 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.45□□□□□ -1.54
SMAD6O43541 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.45□□□□□ -1.54
SMAD6O43541 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.45□□□□□ -1.54
SMAD6O43541 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.45□□□□□ -1.54
SMAD6O43541 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.45□□□□□ -1.54
SMAD6O43541 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.45□□□□□ -1.54
SMAD6O43541 AC079064.1-201ENST00000528365 362 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 EIF4A2P5-201ENST00000529914 499 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 AC068339.2-201ENST00000534395 618 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 OR11J2P-201ENST00000555298 907 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 AC127381.1-201ENST00000555979 939 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 AL049874.4-201ENST00000557593 255 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 AC016180.1-201ENST00000567945 403 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 AC005341.1-201ENST00000571086 708 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 AC005412.1-201ENST00000580812 1049 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC5.45□□□□□ -1.54
SMAD6O43541 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.45□□□□□ -1.54
SMAD6O43541 AC025811.1-201ENST00000604312 472 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 AC073111.2-201ENST00000605657 1075 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 CR589904.2-201ENST00000612533 440 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.45□□□□□ -1.54
SMAD6O43541 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.45□□□□□ -1.54
SMAD6O43541 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.45□□□□□ -1.54
SMAD6O43541 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 AC016769.4-201ENST00000616893 535 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 AP002505.2-201ENST00000623585 696 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.45□□□□□ -1.54
SMAD6O43541 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.45□□□□□ -1.54
SMAD6O43541 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.45□□□□□ -1.54
SMAD6O43541 AL360270.2-201ENST00000562952 5985 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 AC007938.2-201ENST00000604666 2634 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 AC100757.1-201ENST00000616872 1835 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.45□□□□□ -1.54
SMAD6O43541 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.45□□□□□ -1.54
SMAD6O43541 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SMAD6O43541 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.45□□□□□ -1.54
SMAD6O43541 AC109780.1-201ENST00000451768 1344 ntBASIC5.45□□□□□ -1.54
SMAD6O43541 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SMAD6O43541 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SMAD6O43541 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
SMAD6O43541 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.44□□□□□ -1.54
SMAD6O43541 BCORP1-203ENST00000513194 5093 ntBASIC5.44□□□□□ -1.54
SMAD6O43541 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SMAD6O43541 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
SMAD6O43541 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.44□□□□□ -1.54
SMAD6O43541 AC133552.1-201ENST00000569988 4007 ntBASIC5.44□□□□□ -1.54
SMAD6O43541 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SMAD6O43541 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SMAD6O43541 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SMAD6O43541 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SMAD6O43541 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SMAD6O43541 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SMAD6O43541 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SMAD6O43541 MIR133A2-201ENST00000347538 102 ntBASIC5.44□□□□□ -1.54
SMAD6O43541 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.44□□□□□ -1.54
SMAD6O43541 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.44□□□□□ -1.54
SMAD6O43541 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.44□□□□□ -1.54
SMAD6O43541 SNORA67-201ENST00000384423 137 ntBASIC5.44□□□□□ -1.54
SMAD6O43541 MIR122-201ENST00000385044 85 ntBASIC5.44□□□□□ -1.54
SMAD6O43541 MIR223-201ENST00000385204 110 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms