Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.98□□□□□ -1.45
FOXN3O00409 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
FOXN3O00409 HAUS1P1-201ENST00000505275 832 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.98□□□□□ -1.45
FOXN3O00409 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.98□□□□□ -1.45
FOXN3O00409 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
FOXN3O00409 RNU6-615P-201ENST00000516065 106 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.98□□□□□ -1.45
FOXN3O00409 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.98□□□□□ -1.45
FOXN3O00409 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.98□□□□□ -1.45
FOXN3O00409 AL049838.1-201ENST00000563647 981 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 AC010735.1-201ENST00000567305 1026 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.98□□□□□ -1.45
FOXN3O00409 AC027243.2-201ENST00000602530 724 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 AC099785.1-201ENST00000605697 437 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 AL365181.4-201ENST00000609800 547 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 AC025574.2-201ENST00000615621 514 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 AL669942.2-201ENST00000620352 697 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 AL390318.1-201ENST00000624564 687 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
FOXN3O00409 AC027228.2-201ENST00000567141 2154 ntBASIC5.98□□□□□ -1.45
FOXN3O00409 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
FOXN3O00409 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
FOXN3O00409 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
FOXN3O00409 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
FOXN3O00409 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
FOXN3O00409 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
FOXN3O00409 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
FOXN3O00409 MT-RNR2-201ENST00000387347 1559 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
FOXN3O00409 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
FOXN3O00409 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
FOXN3O00409 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
FOXN3O00409 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
FOXN3O00409 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
FOXN3O00409 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
FOXN3O00409 SNORD56.4-201ENST00000363883 71 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 AC234772.1-201ENST00000377927 937 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 U3.28-201ENST00000391249 210 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 RNU6-584P-201ENST00000410350 95 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 HMGN1P20-201ENST00000411849 300 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
FOXN3O00409 PTP4A1P7-201ENST00000423476 514 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 RIMKLBP2-201ENST00000424737 654 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 MTCO2P23-201ENST00000425216 680 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 DPY19L1P2-201ENST00000426647 915 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 AC093422.3-201ENST00000428506 305 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 RPL7P56-201ENST00000429441 717 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 AC022022.1-201ENST00000430304 178 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.97□□□□□ -1.45
FOXN3O00409 RPL12P18-201ENST00000437175 325 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.97□□□□□ -1.45
FOXN3O00409 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
FOXN3O00409 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.97□□□□□ -1.45
FOXN3O00409 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC5.97□□□□□ -1.45
FOXN3O00409 AC104164.3-201ENST00000467363 1258 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
FOXN3O00409 PFN1P8-201ENST00000497012 543 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 AC008427.1-201ENST00000503102 655 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.97□□□□□ -1.45
FOXN3O00409 SNORA43.3-201ENST00000517240 103 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.97□□□□□ -1.45
FOXN3O00409 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.97□□□□□ -1.45
FOXN3O00409 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.97□□□□□ -1.45
FOXN3O00409 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.97□□□□□ -1.45
FOXN3O00409 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
FOXN3O00409 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
FOXN3O00409 AP003717.3-201ENST00000544832 1180 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC5.97□□□□□ -1.45
FOXN3O00409 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.97□□□□□ -1.45
FOXN3O00409 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.97□□□□□ -1.45
FOXN3O00409 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC5.97□□□□□ -1.45
FOXN3O00409 RBM22P12-201ENST00000567098 1255 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 MTND1P8-201ENST00000571424 950 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.97□□□□□ -1.45
FOXN3O00409 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.97□□□□□ -1.45
FOXN3O00409 AC069431.2-201ENST00000604149 1099 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
FOXN3O00409 AC018618.2-201ENST00000604770 446 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 AL096712.1-201ENST00000614561 159 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.97□□□□□ -1.45
FOXN3O00409 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.97□□□□□ -1.45
FOXN3O00409 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
FOXN3O00409 MIR193BHG-214ENST00000641765 509 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.97□□□□□ -1.45
FOXN3O00409 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
FOXN3O00409 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
FOXN3O00409 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.97□□□□□ -1.45
FOXN3O00409 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
FOXN3O00409 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
FOXN3O00409 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
FOXN3O00409 AC004656.1-201ENST00000568479 4951 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 RLIMP2-201ENST00000427891 1563 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 MFSD8-213ENST00000641134 1327 ntBASIC5.97□□□□□ -1.45
FOXN3O00409 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
FOXN3O00409 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
FOXN3O00409 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
FOXN3O00409 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
FOXN3O00409 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
FOXN3O00409 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.96□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms