Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 Metazoa_SRP.29-201ENST00000616220 280 ntBASIC9.39□□□□□ -0.91
RTN4Q9NQC3 FTX_5.1-201ENST00000618701 218 ntBASIC9.39□□□□□ -0.91
RTN4Q9NQC3 AC022106.2-201ENST00000620114 757 ntBASIC9.39□□□□□ -0.91
RTN4Q9NQC3 AC106872.12-201ENST00000622170 547 ntBASIC9.39□□□□□ -0.91
RTN4Q9NQC3 AC024940.5-201ENST00000622889 474 ntBASIC9.39□□□□□ -0.91
RTN4Q9NQC3 UOX-205ENST00000640983 544 ntTSL 4 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 DYNLRB1-201ENST00000300469 1464 ntTSL 5 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 BTF3L4-202ENST00000472944 2159 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
RTN4Q9NQC3 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 AL359195.2-201ENST00000623657 4412 ntBASIC9.38□□□□□ -0.91
RTN4Q9NQC3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 RNF138-201ENST00000257190 2071 ntTSL 2 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 MAPK10-383ENST00000642032 3390 ntBASIC9.38□□□□□ -0.91
RTN4Q9NQC3 OR52B1P-201ENST00000316506 909 ntBASIC9.38□□□□□ -0.91
RTN4Q9NQC3 RNU5A-8P-201ENST00000364102 114 ntBASIC9.38□□□□□ -0.91
RTN4Q9NQC3 SNORD83A-201ENST00000386747 95 ntBASIC9.38□□□□□ -0.91
RTN4Q9NQC3 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 AL022332.1-201ENST00000411511 428 ntTSL 5 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 AC004987.3-201ENST00000413879 771 ntBASIC9.38□□□□□ -0.91
RTN4Q9NQC3 AL807761.1-201ENST00000417622 171 ntBASIC9.38□□□□□ -0.91
RTN4Q9NQC3 TMEM211-202ENST00000423535 695 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 AL606489.2-201ENST00000433886 234 ntBASIC9.38□□□□□ -0.91
RTN4Q9NQC3 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 CYCSP12-201ENST00000437729 300 ntBASIC9.38□□□□□ -0.91
RTN4Q9NQC3 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 AC016691.1-201ENST00000441321 413 ntBASIC9.38□□□□□ -0.91
RTN4Q9NQC3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 RN7SL318P-201ENST00000471955 297 ntBASIC9.38□□□□□ -0.91
RTN4Q9NQC3 AC022730.1-201ENST00000473114 568 ntBASIC9.38□□□□□ -0.91
RTN4Q9NQC3 AC022415.1-202ENST00000486612 523 ntBASIC9.38□□□□□ -0.91
RTN4Q9NQC3 COX7A2P2-201ENST00000505291 250 ntBASIC9.38□□□□□ -0.91
RTN4Q9NQC3 AC008667.3-201ENST00000506892 553 ntTSL 4 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 AC008632.1-201ENST00000519400 753 ntTSL 3 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 RN7SL457P-201ENST00000578760 287 ntBASIC9.38□□□□□ -0.91
RTN4Q9NQC3 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 LINC01926-201ENST00000589476 478 ntTSL 2 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 AC004221.1-201ENST00000592843 844 ntTSL 5 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 CEACAM8-202ENST00000599005 544 ntTSL 5 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 AC012065.3-201ENST00000602736 439 ntBASIC9.38□□□□□ -0.91
RTN4Q9NQC3 AL512782.1-201ENST00000603093 364 ntBASIC9.38□□□□□ -0.91
RTN4Q9NQC3 C1orf186-208ENST00000603378 614 ntTSL 3 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 AC025588.3-201ENST00000604182 274 ntBASIC9.38□□□□□ -0.91
RTN4Q9NQC3 AC004853.1-201ENST00000604902 698 ntBASIC9.38□□□□□ -0.91
RTN4Q9NQC3 Z84480.1-201ENST00000605131 311 ntBASIC9.38□□□□□ -0.91
RTN4Q9NQC3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 uc_338.3-201ENST00000613268 181 ntBASIC9.38□□□□□ -0.91
RTN4Q9NQC3 MIR6831-201ENST00000617240 81 ntBASIC9.38□□□□□ -0.91
RTN4Q9NQC3 Z98752.3-201ENST00000621802 566 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 AL159972.1-201ENST00000625150 448 ntBASIC9.38□□□□□ -0.91
RTN4Q9NQC3 AC024614.3-201ENST00000637860 256 ntBASIC9.38□□□□□ -0.91
RTN4Q9NQC3 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 ZNF680P1-201ENST00000436625 1469 ntBASIC9.38□□□□□ -0.91
RTN4Q9NQC3 OMA1-201ENST00000371226 1935 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 ADGRF2-201ENST00000296862 2127 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 PTER-203ENST00000423462 3212 ntTSL 3 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 GIMAP2-201ENST00000223293 1449 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC9.38□□□□□ -0.91
RTN4Q9NQC3 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
RTN4Q9NQC3 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
RTN4Q9NQC3 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
RTN4Q9NQC3 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
RTN4Q9NQC3 RTP3-201ENST00000296142 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
RTN4Q9NQC3 TRIM51EP-201ENST00000524374 1516 ntBASIC9.37□□□□□ -0.91
RTN4Q9NQC3 AL445250.1-203ENST00000641829 1535 ntBASIC9.37□□□□□ -0.91
RTN4Q9NQC3 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
RTN4Q9NQC3 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
RTN4Q9NQC3 SMG1P6-201ENST00000532337 2930 ntBASIC9.37□□□□□ -0.91
RTN4Q9NQC3 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
RTN4Q9NQC3 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
RTN4Q9NQC3 GTF2IP4-201ENST00000453092 2054 ntBASIC9.37□□□□□ -0.91
RTN4Q9NQC3 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC9.37□□□□□ -0.91
RTN4Q9NQC3 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
RTN4Q9NQC3 IL37-201ENST00000263326 772 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
RTN4Q9NQC3 IL37-202ENST00000311328 652 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
RTN4Q9NQC3 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC9.37□□□□□ -0.91
RTN4Q9NQC3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
RTN4Q9NQC3 AL512430.3-201ENST00000405355 441 ntBASIC9.37□□□□□ -0.91
RTN4Q9NQC3 OR9R1P-201ENST00000412200 877 ntBASIC9.37□□□□□ -0.91
RTN4Q9NQC3 OR10U1P-201ENST00000414690 905 ntBASIC9.37□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms