Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
IFT140Q96RY7 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC8.15□□□□□ -1.11
IFT140Q96RY7 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
IFT140Q96RY7 BRD7P6-201ENST00000431406 1860 ntBASIC8.15□□□□□ -1.11
IFT140Q96RY7 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
IFT140Q96RY7 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC8.15□□□□□ -1.11
IFT140Q96RY7 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
IFT140Q96RY7 AC017104.4-201ENST00000636283 1592 ntBASIC8.15□□□□□ -1.11
IFT140Q96RY7 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
IFT140Q96RY7 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
IFT140Q96RY7 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
IFT140Q96RY7 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
IFT140Q96RY7 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
IFT140Q96RY7 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC8.14□□□□□ -1.11
IFT140Q96RY7 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC8.14□□□□□ -1.11
IFT140Q96RY7 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC8.14□□□□□ -1.11
IFT140Q96RY7 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC8.14□□□□□ -1.11
IFT140Q96RY7 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
IFT140Q96RY7 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC8.14□□□□□ -1.11
IFT140Q96RY7 MIR4420-201ENST00000583944 77 ntBASIC8.14□□□□□ -1.11
IFT140Q96RY7 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC8.14□□□□□ -1.11
IFT140Q96RY7 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC8.14□□□□□ -1.11
IFT140Q96RY7 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
IFT140Q96RY7 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC8.14□□□□□ -1.11
IFT140Q96RY7 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
IFT140Q96RY7 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
IFT140Q96RY7 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
IFT140Q96RY7 SMG1P6-201ENST00000532337 2930 ntBASIC8.14□□□□□ -1.11
IFT140Q96RY7 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC8.14□□□□□ -1.11
IFT140Q96RY7 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
IFT140Q96RY7 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
IFT140Q96RY7 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
IFT140Q96RY7 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
IFT140Q96RY7 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
IFT140Q96RY7 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC8.14□□□□□ -1.11
IFT140Q96RY7 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC8.13□□□□□ -1.11
IFT140Q96RY7 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
IFT140Q96RY7 GNG5P2-201ENST00000372054 207 ntBASIC8.13□□□□□ -1.11
IFT140Q96RY7 SLC4A1APP1-201ENST00000419995 602 ntBASIC8.13□□□□□ -1.11
IFT140Q96RY7 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC8.13□□□□□ -1.11
IFT140Q96RY7 AC114755.5-201ENST00000447760 831 ntBASIC8.13□□□□□ -1.11
IFT140Q96RY7 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC8.13□□□□□ -1.11
IFT140Q96RY7 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC8.13□□□□□ -1.11
IFT140Q96RY7 AC114781.5-201ENST00000615297 108 ntBASIC8.13□□□□□ -1.11
IFT140Q96RY7 AL035461.2-201ENST00000619201 524 ntBASIC8.13□□□□□ -1.11
IFT140Q96RY7 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
IFT140Q96RY7 RNA5SP196-201ENST00000625967 102 ntBASIC8.13□□□□□ -1.11
IFT140Q96RY7 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
IFT140Q96RY7 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
IFT140Q96RY7 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
IFT140Q96RY7 AC104964.3-201ENST00000606115 2860 ntBASIC8.13□□□□□ -1.11
IFT140Q96RY7 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
IFT140Q96RY7 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
IFT140Q96RY7 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
IFT140Q96RY7 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
IFT140Q96RY7 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC8.13□□□□□ -1.11
IFT140Q96RY7 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
IFT140Q96RY7 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
IFT140Q96RY7 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
IFT140Q96RY7 RNU6ATAC5P-201ENST00000388104 126 ntBASIC8.13□□□□□ -1.11
IFT140Q96RY7 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC8.13□□□□□ -1.11
IFT140Q96RY7 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC8.13□□□□□ -1.11
IFT140Q96RY7 RNU6ATAC28P-201ENST00000459249 118 ntBASIC8.13□□□□□ -1.11
IFT140Q96RY7 MIR2116-201ENST00000517221 80 ntBASIC8.13□□□□□ -1.11
IFT140Q96RY7 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC8.13□□□□□ -1.11
IFT140Q96RY7 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC8.13□□□□□ -1.11
IFT140Q96RY7 MIR5699-201ENST00000578903 90 ntBASIC8.13□□□□□ -1.11
IFT140Q96RY7 MIR4444-1-201ENST00000581696 74 ntBASIC8.13□□□□□ -1.11
IFT140Q96RY7 AC069061.3-201ENST00000582254 823 ntBASIC8.13□□□□□ -1.11
IFT140Q96RY7 MIR4444-2-201ENST00000584390 74 ntBASIC8.13□□□□□ -1.11
IFT140Q96RY7 AC006133.1-201ENST00000617106 264 ntBASIC8.13□□□□□ -1.11
IFT140Q96RY7 AL022401.1-201ENST00000619498 108 ntBASIC8.13□□□□□ -1.11
IFT140Q96RY7 AL049536.1-201ENST00000625043 744 ntBASIC8.13□□□□□ -1.11
IFT140Q96RY7 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC8.13□□□□□ -1.11
IFT140Q96RY7 AL596275.2-208ENST00000641192 594 ntBASIC8.13□□□□□ -1.11
IFT140Q96RY7 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC8.13□□□□□ -1.11
IFT140Q96RY7 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
IFT140Q96RY7 AC068769.1-201ENST00000474767 2426 ntBASIC8.12□□□□□ -1.11
IFT140Q96RY7 CYP1D1P-201ENST00000416662 1433 ntBASIC8.12□□□□□ -1.11
IFT140Q96RY7 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
IFT140Q96RY7 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
IFT140Q96RY7 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
IFT140Q96RY7 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
IFT140Q96RY7 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
IFT140Q96RY7 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
IFT140Q96RY7 RNA5SP223-201ENST00000365174 120 ntBASIC8.12□□□□□ -1.11
IFT140Q96RY7 LRRC37BP1-201ENST00000398851 714 ntBASIC8.12□□□□□ -1.11
IFT140Q96RY7 DNAJA1P3-201ENST00000399417 1194 ntBASIC8.12□□□□□ -1.11
IFT140Q96RY7 AL390316.1-201ENST00000406279 553 ntBASIC8.12□□□□□ -1.11
IFT140Q96RY7 IMPA1P1-201ENST00000510718 842 ntBASIC8.12□□□□□ -1.11
IFT140Q96RY7 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC8.12□□□□□ -1.11
IFT140Q96RY7 SEPT10P1-201ENST00000517342 1162 ntBASIC8.12□□□□□ -1.11
IFT140Q96RY7 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC8.12□□□□□ -1.11
IFT140Q96RY7 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC8.12□□□□□ -1.11
IFT140Q96RY7 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC8.12□□□□□ -1.11
IFT140Q96RY7 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC8.12□□□□□ -1.11
IFT140Q96RY7 UBA2-208ENST00000592791 910 ntTSL 2 BASIC8.12□□□□□ -1.11
IFT140Q96RY7 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC8.12□□□□□ -1.11
IFT140Q96RY7 AC090948.1-201ENST00000607464 549 ntBASIC8.12□□□□□ -1.11
IFT140Q96RY7 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms