Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC068870.1-201ENST00000563737 2455 ntBASIC6.31□□□□□ -1.4
CDK5RAP3Q96JB5 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 RNU6-252P-201ENST00000363232 107 ntBASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 RNA5SP284-201ENST00000384547 118 ntBASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 OOSP1-201ENST00000398992 1270 ntBASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 AL009179.1-201ENST00000406085 265 ntBASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 AL355615.1-201ENST00000406187 641 ntBASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 SNORA11.5-201ENST00000408163 128 ntBASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 MTCO2P8-201ENST00000412213 658 ntBASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 MTCO2P23-201ENST00000425216 680 ntBASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 USP12PY-201ENST00000427677 1064 ntBASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 MTCYBP29-201ENST00000436327 1006 ntBASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 RPL7P33-201ENST00000444159 742 ntBASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 HMGB1P26-201ENST00000452520 628 ntBASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 DUXAP8-207ENST00000456786 622 ntBASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 RN7SL72P-201ENST00000460697 269 ntBASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 AC124016.2-201ENST00000610058 665 ntBASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 DUXAP10-204ENST00000612052 616 ntBASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 RNU6-1192P-201ENST00000612197 107 ntBASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 AC015712.7-201ENST00000615211 635 ntBASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 RNU6-489P-201ENST00000618289 107 ntBASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 MIR6861-201ENST00000618657 64 ntBASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 CASC19-281ENST00000642118 1554 ntBASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 MTCO1P15-201ENST00000529569 1526 ntBASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 AC010266.2-201ENST00000564741 3255 ntBASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDK5RAP3Q96JB5 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 AC133552.1-201ENST00000569988 4007 ntBASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 GAPDHP24-201ENST00000328713 983 ntBASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 RNU6-481P-201ENST00000384194 107 ntBASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 RPL22P22-201ENST00000395439 379 ntBASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 AL354868.1-201ENST00000417077 482 ntBASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 AC006065.1-201ENST00000422539 802 ntBASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 MTCO1P43-201ENST00000431831 488 ntBASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 AC005297.1-201ENST00000444765 862 ntBASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 AC104164.3-201ENST00000467363 1258 ntBASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 AC007998.1-201ENST00000474156 672 ntBASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 RPS17P5-201ENST00000498293 408 ntBASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 AC069306.1-201ENST00000507006 843 ntBASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 AP000859.1-201ENST00000525536 307 ntBASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 AC122688.1-201ENST00000541494 223 ntBASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 H3F3BP2-201ENST00000583907 357 ntBASIC6.29□□□□□ -1.4
CDK5RAP3Q96JB5 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms