Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 ST13P12-201ENST00000508958 1094 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AC026782.2-201ENST00000510845 636 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AC114781.3-201ENST00000512083 142 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 IGLV3-30-201ENST00000524362 298 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 OR8I1P-201ENST00000529291 931 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AC013444.2-201ENST00000603317 787 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 LSM1P2-201ENST00000604911 322 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AL451064.1-201ENST00000607718 471 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 U6.48-201ENST00000618523 106 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AC123767.1-202ENST00000620407 817 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AC078883.4-201ENST00000623218 367 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AC010435.1-201ENST00000623353 1177 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.39□□□□□ -1.55
CTHRC1Q96CG8 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 SNORD116-12-201ENST00000384468 92 ntBASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 RNU6-636P-201ENST00000384598 107 ntBASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 RPL11P3-201ENST00000395256 523 ntBASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AL590806.1-201ENST00000415818 853 ntBASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 DPPA2P2-201ENST00000418220 897 ntBASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 IPPKP1-201ENST00000422501 768 ntBASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AC021876.1-201ENST00000425959 359 ntBASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 USP9YP11-201ENST00000427537 717 ntBASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 PTGES3P1-201ENST00000439531 483 ntBASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AC097499.1-201ENST00000444277 208 ntBASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 SETD6P1-201ENST00000444575 317 ntBASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AL589880.1-201ENST00000448271 287 ntBASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 OR7E116P-201ENST00000448529 957 ntBASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 ACA64.1-201ENST00000459171 127 ntBASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AC011476.1-201ENST00000466725 307 ntBASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AC098583.1-201ENST00000480875 255 ntBASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 RNU6-1308P-201ENST00000516817 103 ntBASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 DUX4L52-201ENST00000549363 777 ntBASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.38□□□□□ -1.55
CTHRC1Q96CG8 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms