Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 AC093084.1-201ENST00000424233 687 ntBASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 RPL5P2-201ENST00000429598 854 ntBASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 RBMY2QP-201ENST00000429799 1147 ntBASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 AL049745.1-201ENST00000433953 286 ntBASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 RN7SL188P-201ENST00000469842 285 ntBASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 BRD9P1-201ENST00000529855 560 ntBASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 OR8G3P-201ENST00000533406 921 ntBASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 GSTP1P1-201ENST00000548078 319 ntBASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 AC084824.2-201ENST00000548906 345 ntBASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 AC127381.1-201ENST00000555979 939 ntBASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 AC073869.8-201ENST00000641806 335 ntBASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 HSPA8P17-201ENST00000427029 1382 ntBASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
HDDC3Q8N4P3 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 NXF4-202ENST00000416098 1465 ntBASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 VPS35P1-201ENST00000563400 1518 ntBASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 MIR141-201ENST00000384975 95 ntBASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 MIR105-1-201ENST00000385222 81 ntBASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 RAB28P1-201ENST00000411517 641 ntBASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 FAR2P2-201ENST00000413041 594 ntBASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 GLUD1P9-201ENST00000420997 1173 ntBASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 FAR2P4-202ENST00000425399 584 ntBASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 AC009220.1-201ENST00000451614 275 ntBASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 CD24P2-201ENST00000565486 219 ntBASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 AC027281.1-201ENST00000574178 758 ntBASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 MIR4330-201ENST00000579077 105 ntBASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 AP000769.2-201ENST00000602344 396 ntBASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 FAM25E-202ENST00000608562 189 ntBASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 AL121890.2-201ENST00000617644 465 ntBASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 AC091953.3-201ENST00000623220 236 ntBASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 LINC01739-205ENST00000641890 573 ntBASIC5.4□□□□□ -1.54
HDDC3Q8N4P3 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HDDC3Q8N4P3 AC092451.3-201ENST00000625067 1343 ntBASIC5.4□□□□□ -1.55
HDDC3Q8N4P3 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.4□□□□□ -1.55
HDDC3Q8N4P3 AL078621.3-201ENST00000623707 2042 ntBASIC5.4□□□□□ -1.55
HDDC3Q8N4P3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
HDDC3Q8N4P3 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.39□□□□□ -1.55
HDDC3Q8N4P3 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HDDC3Q8N4P3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
HDDC3Q8N4P3 AC093671.1-201ENST00000624981 2929 ntBASIC5.39□□□□□ -1.55
HDDC3Q8N4P3 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HDDC3Q8N4P3 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HDDC3Q8N4P3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
HDDC3Q8N4P3 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HDDC3Q8N4P3 SNORA17.1-201ENST00000362945 126 ntBASIC5.39□□□□□ -1.55
HDDC3Q8N4P3 RNU6-891P-201ENST00000384280 111 ntBASIC5.39□□□□□ -1.55
HDDC3Q8N4P3 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HDDC3Q8N4P3 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HDDC3Q8N4P3 AC211486.3-201ENST00000412694 621 ntBASIC5.39□□□□□ -1.55
HDDC3Q8N4P3 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.39□□□□□ -1.55
HDDC3Q8N4P3 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.39□□□□□ -1.55
HDDC3Q8N4P3 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.39□□□□□ -1.55
HDDC3Q8N4P3 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.39□□□□□ -1.55
HDDC3Q8N4P3 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.39□□□□□ -1.55
HDDC3Q8N4P3 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.39□□□□□ -1.55
HDDC3Q8N4P3 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.39□□□□□ -1.55
HDDC3Q8N4P3 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.39□□□□□ -1.55
HDDC3Q8N4P3 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.39□□□□□ -1.55
HDDC3Q8N4P3 AC108751.3-201ENST00000461814 1020 ntBASIC5.39□□□□□ -1.55
HDDC3Q8N4P3 RPL7P40-201ENST00000481703 745 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms