Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 THAP12P4-201ENST00000528321 2266 ntBASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
H3F3CQ6NXT2 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 THAP12P5-201ENST00000405864 2275 ntBASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 RNA5SP90-201ENST00000364801 99 ntBASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 OR8V1P-201ENST00000395193 873 ntBASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 AL109941.1-201ENST00000401925 229 ntBASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 AL589647.1-201ENST00000402485 466 ntBASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 AC093162.1-201ENST00000419682 124 ntBASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 HSPE1P16-201ENST00000426640 348 ntBASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 AC124944.2-201ENST00000429866 1242 ntBASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 KNOP1P3-201ENST00000446933 426 ntBASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 AC107015.1-201ENST00000466902 747 ntBASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 AC006427.1-201ENST00000514359 712 ntBASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 SEPT10P1-201ENST00000517342 1162 ntBASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 AL121839.1-201ENST00000556233 1185 ntBASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 AC018552.1-201ENST00000562099 811 ntBASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 AC234775.3-201ENST00000564612 656 ntBASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 MIR4675-201ENST00000577898 77 ntBASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 MIR4472-2-201ENST00000582069 67 ntBASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 AP005131.7-201ENST00000610087 611 ntBASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 BNIP3P41-202ENST00000616656 861 ntBASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 AC090510.2-201ENST00000617465 629 ntBASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
H3F3CQ6NXT2 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
H3F3CQ6NXT2 ABCC13-202ENST00000463099 3842 ntBASIC4.84□□□□□ -1.64
H3F3CQ6NXT2 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
H3F3CQ6NXT2 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
H3F3CQ6NXT2 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.84□□□□□ -1.64
H3F3CQ6NXT2 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
H3F3CQ6NXT2 AC104260.2-201ENST00000623551 3497 ntBASIC4.84□□□□□ -1.64
H3F3CQ6NXT2 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.84□□□□□ -1.64
H3F3CQ6NXT2 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 AC019072.1-201ENST00000604535 1551 ntBASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 AC053481.2-202ENST00000582394 1500 ntBASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 CHMP1B2P-201ENST00000399581 597 ntBASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 AL645733.1-201ENST00000402250 217 ntBASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 SEPT7P8-201ENST00000413308 775 ntBASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 HYALP1-201ENST00000417674 1279 ntBASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 AL161722.2-201ENST00000434731 981 ntBASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 AC022133.1-201ENST00000490961 571 ntBASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.83□□□□□ -1.64
H3F3CQ6NXT2 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms