Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VBP1P61758 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.54□□□□□ -1.68
VBP1P61758 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VBP1P61758 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VBP1P61758 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VBP1P61758 TMSB4XP2-201ENST00000335179 210 ntBASIC4.54□□□□□ -1.68
VBP1P61758 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.54□□□□□ -1.68
VBP1P61758 MIR27A-201ENST00000385073 78 ntBASIC4.54□□□□□ -1.68
VBP1P61758 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
VBP1P61758 AC245060.4-201ENST00000413293 1121 ntBASIC4.54□□□□□ -1.68
VBP1P61758 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.54□□□□□ -1.68
VBP1P61758 EIF4HP2-201ENST00000424380 563 ntBASIC4.54□□□□□ -1.68
VBP1P61758 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.54□□□□□ -1.68
VBP1P61758 NMNAT1P2-201ENST00000435192 860 ntBASIC4.54□□□□□ -1.68
VBP1P61758 LINC00328-2P-201ENST00000436585 219 ntBASIC4.54□□□□□ -1.68
VBP1P61758 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VBP1P61758 RPL6P30-201ENST00000443382 862 ntBASIC4.54□□□□□ -1.68
VBP1P61758 Z80107.2-201ENST00000445127 392 ntBASIC4.54□□□□□ -1.68
VBP1P61758 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC4.54□□□□□ -1.68
VBP1P61758 NDUFS5P3-201ENST00000450668 321 ntBASIC4.54□□□□□ -1.68
VBP1P61758 RPL23AP37-201ENST00000479658 549 ntBASIC4.54□□□□□ -1.68
VBP1P61758 PRELID3BP7-201ENST00000503606 469 ntBASIC4.54□□□□□ -1.68
VBP1P61758 HMGB1P44-201ENST00000508597 572 ntBASIC4.54□□□□□ -1.68
VBP1P61758 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC4.54□□□□□ -1.68
VBP1P61758 HSD3BP3-201ENST00000514706 994 ntBASIC4.54□□□□□ -1.68
VBP1P61758 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.54□□□□□ -1.68
VBP1P61758 AP001804.2-201ENST00000533932 910 ntBASIC4.54□□□□□ -1.68
VBP1P61758 PSMC1P8-201ENST00000536820 1296 ntBASIC4.54□□□□□ -1.68
VBP1P61758 AC007956.1-201ENST00000555623 542 ntBASIC4.54□□□□□ -1.68
VBP1P61758 AC090515.3-201ENST00000560431 315 ntBASIC4.54□□□□□ -1.68
VBP1P61758 NDUFB4P11-201ENST00000560510 395 ntBASIC4.54□□□□□ -1.68
VBP1P61758 AC116553.2-201ENST00000564203 463 ntBASIC4.54□□□□□ -1.68
VBP1P61758 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC4.54□□□□□ -1.68
VBP1P61758 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
VBP1P61758 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.54□□□□□ -1.68
VBP1P61758 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.54□□□□□ -1.68
VBP1P61758 PPATP2-201ENST00000605635 508 ntBASIC4.54□□□□□ -1.68
VBP1P61758 MIR6885-201ENST00000612241 66 ntBASIC4.54□□□□□ -1.68
VBP1P61758 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.54□□□□□ -1.68
VBP1P61758 MIR6715B-201ENST00000637172 77 ntBASIC4.54□□□□□ -1.68
VBP1P61758 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VBP1P61758 AC068446.1-201ENST00000556425 1549 ntBASIC4.54□□□□□ -1.68
VBP1P61758 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VBP1P61758 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.54□□□□□ -1.68
VBP1P61758 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.54□□□□□ -1.68
VBP1P61758 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
VBP1P61758 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
VBP1P61758 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
VBP1P61758 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
VBP1P61758 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
VBP1P61758 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
VBP1P61758 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
VBP1P61758 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.53□□□□□ -1.68
VBP1P61758 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VBP1P61758 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VBP1P61758 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
VBP1P61758 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
VBP1P61758 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VBP1P61758 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.53□□□□□ -1.68
VBP1P61758 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VBP1P61758 SRSF1P1-201ENST00000424058 520 ntBASIC4.53□□□□□ -1.68
VBP1P61758 GAPDHP34-201ENST00000432112 823 ntBASIC4.53□□□□□ -1.68
VBP1P61758 GAPDHP59-201ENST00000435908 267 ntBASIC4.53□□□□□ -1.68
VBP1P61758 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
VBP1P61758 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.53□□□□□ -1.68
VBP1P61758 RPS26P2-201ENST00000440331 348 ntBASIC4.53□□□□□ -1.68
VBP1P61758 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.53□□□□□ -1.68
VBP1P61758 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
VBP1P61758 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.53□□□□□ -1.68
VBP1P61758 AC104634.1-201ENST00000452720 462 ntBASIC4.53□□□□□ -1.68
VBP1P61758 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.53□□□□□ -1.68
VBP1P61758 RN7SL727P-201ENST00000482164 296 ntBASIC4.53□□□□□ -1.68
VBP1P61758 AC097173.1-201ENST00000505862 819 ntBASIC4.53□□□□□ -1.68
VBP1P61758 AC060775.1-201ENST00000518241 520 ntBASIC4.53□□□□□ -1.68
VBP1P61758 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC4.53□□□□□ -1.68
VBP1P61758 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.53□□□□□ -1.68
VBP1P61758 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.53□□□□□ -1.68
VBP1P61758 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.53□□□□□ -1.68
VBP1P61758 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.53□□□□□ -1.68
VBP1P61758 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC4.53□□□□□ -1.68
VBP1P61758 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC4.53□□□□□ -1.68
VBP1P61758 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.53□□□□□ -1.68
VBP1P61758 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC4.53□□□□□ -1.68
VBP1P61758 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.53□□□□□ -1.68
VBP1P61758 AC012616.1-201ENST00000600294 197 ntBASIC4.53□□□□□ -1.68
VBP1P61758 AL512430.4-201ENST00000603085 613 ntBASIC4.53□□□□□ -1.68
VBP1P61758 AC004839.1-201ENST00000610269 501 ntBASIC4.53□□□□□ -1.68
VBP1P61758 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.53□□□□□ -1.68
VBP1P61758 AL118522.2-201ENST00000616045 615 ntBASIC4.53□□□□□ -1.68
VBP1P61758 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.53□□□□□ -1.68
VBP1P61758 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
VBP1P61758 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.53□□□□□ -1.68
VBP1P61758 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
VBP1P61758 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.53□□□□□ -1.68
VBP1P61758 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.69
VBP1P61758 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.52□□□□□ -1.69
VBP1P61758 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VBP1P61758 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
VBP1P61758 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VBP1P61758 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms