Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.49□□□□□ -1.53
LHX1P48742 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.49□□□□□ -1.53
LHX1P48742 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
LHX1P48742 CHMP1B2P-201ENST00000399581 597 ntBASIC5.49□□□□□ -1.53
LHX1P48742 RPS27AP6-201ENST00000427962 448 ntBASIC5.49□□□□□ -1.53
LHX1P48742 RSL24D1P8-201ENST00000434442 492 ntBASIC5.49□□□□□ -1.53
LHX1P48742 AC114878.1-201ENST00000441166 358 ntBASIC5.49□□□□□ -1.53
LHX1P48742 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.49□□□□□ -1.53
LHX1P48742 BX842559.2-201ENST00000451418 605 ntBASIC5.49□□□□□ -1.53
LHX1P48742 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.49□□□□□ -1.53
LHX1P48742 AC097173.1-201ENST00000505862 819 ntBASIC5.49□□□□□ -1.53
LHX1P48742 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.49□□□□□ -1.53
LHX1P48742 AC004980.4-201ENST00000513375 203 ntBASIC5.49□□□□□ -1.53
LHX1P48742 RFPL4AP3-201ENST00000515267 345 ntBASIC5.49□□□□□ -1.53
LHX1P48742 RN7SKP147-201ENST00000517154 244 ntBASIC5.49□□□□□ -1.53
LHX1P48742 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.49□□□□□ -1.53
LHX1P48742 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.49□□□□□ -1.53
LHX1P48742 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.49□□□□□ -1.53
LHX1P48742 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
LHX1P48742 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.49□□□□□ -1.53
LHX1P48742 RN7SL290P-201ENST00000578661 300 ntBASIC5.49□□□□□ -1.53
LHX1P48742 MIR4443-201ENST00000585052 53 ntBASIC5.49□□□□□ -1.53
LHX1P48742 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.49□□□□□ -1.53
LHX1P48742 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.49□□□□□ -1.53
LHX1P48742 NXF4-202ENST00000416098 1465 ntBASIC5.49□□□□□ -1.53
LHX1P48742 CASC19-281ENST00000642118 1554 ntBASIC5.49□□□□□ -1.53
LHX1P48742 AC125336.1-201ENST00000508893 2827 ntBASIC5.49□□□□□ -1.53
LHX1P48742 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.49□□□□□ -1.53
LHX1P48742 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LHX1P48742 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
LHX1P48742 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LHX1P48742 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
LHX1P48742 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
LHX1P48742 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LHX1P48742 AP001284.1-201ENST00000528393 2118 ntBASIC5.48□□□□□ -1.53
LHX1P48742 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
LHX1P48742 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LHX1P48742 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LHX1P48742 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
LHX1P48742 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.48□□□□□ -1.53
LHX1P48742 RN7SKP113-201ENST00000363891 295 ntBASIC5.48□□□□□ -1.53
LHX1P48742 SNORA58B-201ENST00000364259 136 ntBASIC5.48□□□□□ -1.53
LHX1P48742 RNU4-4P-201ENST00000364588 130 ntBASIC5.48□□□□□ -1.53
LHX1P48742 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.48□□□□□ -1.53
LHX1P48742 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.48□□□□□ -1.53
LHX1P48742 RN7SKP114-201ENST00000410327 279 ntBASIC5.48□□□□□ -1.53
LHX1P48742 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.48□□□□□ -1.53
LHX1P48742 AC007394.1-201ENST00000421941 531 ntBASIC5.48□□□□□ -1.53
LHX1P48742 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.48□□□□□ -1.53
LHX1P48742 AC009238.2-201ENST00000431026 355 ntBASIC5.48□□□□□ -1.53
LHX1P48742 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
LHX1P48742 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.48□□□□□ -1.53
LHX1P48742 OR52A4P-202ENST00000481634 799 ntBASIC5.48□□□□□ -1.53
LHX1P48742 HMGN2P25-201ENST00000486956 268 ntBASIC5.48□□□□□ -1.53
LHX1P48742 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.48□□□□□ -1.53
LHX1P48742 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.48□□□□□ -1.53
LHX1P48742 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.48□□□□□ -1.53
LHX1P48742 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LHX1P48742 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.48□□□□□ -1.53
LHX1P48742 AC104997.1-201ENST00000519761 717 ntBASIC5.48□□□□□ -1.53
LHX1P48742 AC092709.1-201ENST00000521355 1045 ntBASIC5.48□□□□□ -1.53
LHX1P48742 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.48□□□□□ -1.53
LHX1P48742 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.48□□□□□ -1.53
LHX1P48742 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.48□□□□□ -1.53
LHX1P48742 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.48□□□□□ -1.53
LHX1P48742 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.48□□□□□ -1.53
LHX1P48742 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.48□□□□□ -1.53
LHX1P48742 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.48□□□□□ -1.53
LHX1P48742 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.48□□□□□ -1.53
LHX1P48742 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LHX1P48742 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.48□□□□□ -1.53
LHX1P48742 MIR4433B-201ENST00000581329 102 ntBASIC5.48□□□□□ -1.53
LHX1P48742 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.48□□□□□ -1.53
LHX1P48742 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.48□□□□□ -1.53
LHX1P48742 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.48□□□□□ -1.53
LHX1P48742 AL021368.1-201ENST00000607490 540 ntBASIC5.48□□□□□ -1.53
LHX1P48742 RNU6-84P-201ENST00000607737 102 ntBASIC5.48□□□□□ -1.53
LHX1P48742 AC093799.2-201ENST00000610062 578 ntBASIC5.48□□□□□ -1.53
LHX1P48742 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.48□□□□□ -1.53
LHX1P48742 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LHX1P48742 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
LHX1P48742 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LHX1P48742 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.48□□□□□ -1.53
LHX1P48742 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
LHX1P48742 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LHX1P48742 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
LHX1P48742 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
LHX1P48742 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
LHX1P48742 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
LHX1P48742 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LHX1P48742 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LHX1P48742 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LHX1P48742 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LHX1P48742 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
LHX1P48742 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.47□□□□□ -1.53
LHX1P48742 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.47□□□□□ -1.53
LHX1P48742 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
LHX1P48742 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.47□□□□□ -1.53
LHX1P48742 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
LHX1P48742 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms