Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC004980.4-201ENST00000513375 203 ntBASIC5.67□□□□□ -1.5
MTHFRP42898 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.67□□□□□ -1.5
MTHFRP42898 OR5AZ1P-201ENST00000527448 943 ntBASIC5.67□□□□□ -1.5
MTHFRP42898 EDDM3DP-201ENST00000554692 434 ntBASIC5.67□□□□□ -1.5
MTHFRP42898 AC122134.1-201ENST00000565664 1104 ntBASIC5.67□□□□□ -1.5
MTHFRP42898 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
MTHFRP42898 DHFRP1-201ENST00000579682 559 ntBASIC5.67□□□□□ -1.5
MTHFRP42898 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.67□□□□□ -1.5
MTHFRP42898 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.67□□□□□ -1.5
MTHFRP42898 AC006272.2-201ENST00000594725 163 ntBASIC5.67□□□□□ -1.5
MTHFRP42898 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.67□□□□□ -1.5
MTHFRP42898 AL590410.1-201ENST00000617925 333 ntBASIC5.67□□□□□ -1.5
MTHFRP42898 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.67□□□□□ -1.5
MTHFRP42898 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MTHFRP42898 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
MTHFRP42898 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.67□□□□□ -1.5
MTHFRP42898 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.67□□□□□ -1.5
MTHFRP42898 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
MTHFRP42898 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
MTHFRP42898 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
MTHFRP42898 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
MTHFRP42898 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
MTHFRP42898 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.67□□□□□ -1.5
MTHFRP42898 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
MTHFRP42898 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
MTHFRP42898 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
MTHFRP42898 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
MTHFRP42898 AC114774.1-201ENST00000507410 1770 ntBASIC5.66□□□□□ -1.5
MTHFRP42898 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
MTHFRP42898 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
MTHFRP42898 RNU6-819P-201ENST00000364116 107 ntBASIC5.66□□□□□ -1.5
MTHFRP42898 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MTHFRP42898 SNORA51.8-201ENST00000384234 132 ntBASIC5.66□□□□□ -1.5
MTHFRP42898 RNU6-564P-201ENST00000410983 104 ntBASIC5.66□□□□□ -1.5
MTHFRP42898 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.66□□□□□ -1.5
MTHFRP42898 RNGTTP1-201ENST00000420965 728 ntBASIC5.66□□□□□ -1.5
MTHFRP42898 Z92846.1-201ENST00000456203 268 ntBASIC5.66□□□□□ -1.5
MTHFRP42898 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.66□□□□□ -1.5
MTHFRP42898 AC009127.1-201ENST00000467090 155 ntBASIC5.66□□□□□ -1.5
MTHFRP42898 AC092324.1-201ENST00000468671 324 ntBASIC5.66□□□□□ -1.5
MTHFRP42898 AC105233.1-201ENST00000498840 781 ntBASIC5.66□□□□□ -1.5
MTHFRP42898 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.66□□□□□ -1.5
MTHFRP42898 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.66□□□□□ -1.5
MTHFRP42898 RPS27AP18-201ENST00000515536 459 ntBASIC5.66□□□□□ -1.5
MTHFRP42898 RNU6-319P-201ENST00000516025 108 ntBASIC5.66□□□□□ -1.5
MTHFRP42898 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.66□□□□□ -1.5
MTHFRP42898 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.66□□□□□ -1.5
MTHFRP42898 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.66□□□□□ -1.5
MTHFRP42898 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.66□□□□□ -1.5
MTHFRP42898 MIR4675-201ENST00000577898 77 ntBASIC5.66□□□□□ -1.5
MTHFRP42898 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.66□□□□□ -1.5
MTHFRP42898 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.66□□□□□ -1.5
MTHFRP42898 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.66□□□□□ -1.5
MTHFRP42898 AF230666.2-201ENST00000602328 725 ntBASIC5.66□□□□□ -1.5
MTHFRP42898 AC012557.1-201ENST00000607115 611 ntBASIC5.66□□□□□ -1.5
MTHFRP42898 RNA5SP439-201ENST00000617595 124 ntBASIC5.66□□□□□ -1.5
MTHFRP42898 AL731566.2-201ENST00000618971 317 ntBASIC5.66□□□□□ -1.5
MTHFRP42898 AP001005.3-201ENST00000622049 129 ntBASIC5.66□□□□□ -1.5
MTHFRP42898 AC104820.1-201ENST00000624183 307 ntBASIC5.66□□□□□ -1.5
MTHFRP42898 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.66□□□□□ -1.5
MTHFRP42898 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
MTHFRP42898 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
MTHFRP42898 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
MTHFRP42898 STX3-208ENST00000641815 3236 ntBASIC5.66□□□□□ -1.5
MTHFRP42898 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
MTHFRP42898 AC026951.1-201ENST00000559530 2459 ntBASIC5.66□□□□□ -1.5
MTHFRP42898 INTS6P1-201ENST00000504674 2530 ntBASIC5.66□□□□□ -1.5
MTHFRP42898 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
MTHFRP42898 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.65□□□□□ -1.5
MTHFRP42898 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
MTHFRP42898 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
MTHFRP42898 HSPA8P14-201ENST00000552265 1805 ntBASIC5.65□□□□□ -1.5
MTHFRP42898 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
MTHFRP42898 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
MTHFRP42898 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.65□□□□□ -1.5
MTHFRP42898 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
MTHFRP42898 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
MTHFRP42898 RPL11P3-201ENST00000395256 523 ntBASIC5.65□□□□□ -1.5
MTHFRP42898 CYB5AP4-201ENST00000396692 399 ntBASIC5.65□□□□□ -1.5
MTHFRP42898 FABP12P1-201ENST00000401911 322 ntBASIC5.65□□□□□ -1.5
MTHFRP42898 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
MTHFRP42898 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.65□□□□□ -1.5
MTHFRP42898 ARAFP1-201ENST00000422172 605 ntBASIC5.65□□□□□ -1.5
MTHFRP42898 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.65□□□□□ -1.5
MTHFRP42898 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.65□□□□□ -1.5
MTHFRP42898 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.65□□□□□ -1.5
MTHFRP42898 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.65□□□□□ -1.5
MTHFRP42898 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.65□□□□□ -1.5
MTHFRP42898 RPL31P44-201ENST00000447680 377 ntBASIC5.65□□□□□ -1.5
MTHFRP42898 RPL31P53-201ENST00000457065 348 ntBASIC5.65□□□□□ -1.5
MTHFRP42898 RPL7P40-201ENST00000481703 745 ntBASIC5.65□□□□□ -1.5
MTHFRP42898 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.65□□□□□ -1.5
MTHFRP42898 AL671862.1-201ENST00000515851 349 ntBASIC5.65□□□□□ -1.5
MTHFRP42898 SNORA70.17-201ENST00000516449 133 ntBASIC5.65□□□□□ -1.5
MTHFRP42898 FTH1P11-201ENST00000517577 551 ntBASIC5.65□□□□□ -1.5
MTHFRP42898 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.65□□□□□ -1.5
MTHFRP42898 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.65□□□□□ -1.5
MTHFRP42898 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
MTHFRP42898 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.65□□□□□ -1.5
MTHFRP42898 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms