Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGCLP35914 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGCLP35914 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGCLP35914 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGCLP35914 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.13□□□□□ -1.59
HMGCLP35914 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HMGCLP35914 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HMGCLP35914 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGCLP35914 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGCLP35914 PCAT14-202ENST00000627127 3935 ntBASIC5.12□□□□□ -1.59
HMGCLP35914 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGCLP35914 THAP12P5-201ENST00000405864 2275 ntBASIC5.12□□□□□ -1.59
HMGCLP35914 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGCLP35914 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGCLP35914 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HMGCLP35914 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.12□□□□□ -1.59
HMGCLP35914 AC211486.3-201ENST00000412694 621 ntBASIC5.12□□□□□ -1.59
HMGCLP35914 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HMGCLP35914 COX6CP13-201ENST00000428703 226 ntBASIC5.12□□□□□ -1.59
HMGCLP35914 AC013410.1-201ENST00000436223 1232 ntBASIC5.12□□□□□ -1.59
HMGCLP35914 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.12□□□□□ -1.59
HMGCLP35914 AURKAPS1-201ENST00000451805 1212 ntBASIC5.12□□□□□ -1.59
HMGCLP35914 RN7SL177P-201ENST00000476596 299 ntBASIC5.12□□□□□ -1.59
HMGCLP35914 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGCLP35914 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
HMGCLP35914 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.12□□□□□ -1.59
HMGCLP35914 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.12□□□□□ -1.59
HMGCLP35914 SCARNA21.2-201ENST00000516600 166 ntBASIC5.12□□□□□ -1.59
HMGCLP35914 IGLV2-28-201ENST00000520681 304 ntBASIC5.12□□□□□ -1.59
HMGCLP35914 AC100784.1-201ENST00000522790 310 ntBASIC5.12□□□□□ -1.59
HMGCLP35914 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.12□□□□□ -1.59
HMGCLP35914 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGCLP35914 AL358913.1-201ENST00000554342 121 ntBASIC5.12□□□□□ -1.59
HMGCLP35914 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.12□□□□□ -1.59
HMGCLP35914 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.12□□□□□ -1.59
HMGCLP35914 DPRXP4-201ENST00000578053 568 ntBASIC5.12□□□□□ -1.59
HMGCLP35914 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.12□□□□□ -1.59
HMGCLP35914 AL139407.1-201ENST00000613826 1175 ntBASIC5.12□□□□□ -1.59
HMGCLP35914 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HMGCLP35914 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.12□□□□□ -1.59
HMGCLP35914 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGCLP35914 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HMGCLP35914 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HMGCLP35914 RARSP1-201ENST00000542842 1418 ntBASIC5.12□□□□□ -1.59
HMGCLP35914 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HMGCLP35914 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCLP35914 AC114947.2-201ENST00000565748 2125 ntBASIC5.11□□□□□ -1.59
HMGCLP35914 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCLP35914 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCLP35914 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCLP35914 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCLP35914 SNORA2.3-201ENST00000383920 135 ntBASIC5.11□□□□□ -1.59
HMGCLP35914 RPL21P67-201ENST00000402896 478 ntBASIC5.11□□□□□ -1.59
HMGCLP35914 MIR1178-201ENST00000408396 91 ntBASIC5.11□□□□□ -1.59
HMGCLP35914 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.11□□□□□ -1.59
HMGCLP35914 RN7SKP114-201ENST00000410327 279 ntBASIC5.11□□□□□ -1.59
HMGCLP35914 SNORA79B-201ENST00000410557 148 ntBASIC5.11□□□□□ -1.59
HMGCLP35914 RPS20P25-201ENST00000412447 352 ntBASIC5.11□□□□□ -1.59
HMGCLP35914 SETP15-201ENST00000412724 337 ntBASIC5.11□□□□□ -1.59
HMGCLP35914 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGCLP35914 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGCLP35914 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGCLP35914 EEF1B2P5-201ENST00000444820 548 ntBASIC5.11□□□□□ -1.59
HMGCLP35914 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.11□□□□□ -1.59
HMGCLP35914 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGCLP35914 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HMGCLP35914 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGCLP35914 RN7SL443P-201ENST00000464331 290 ntBASIC5.11□□□□□ -1.59
HMGCLP35914 AC005532.2-201ENST00000467154 373 ntBASIC5.11□□□□□ -1.59
HMGCLP35914 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGCLP35914 AC005412.2-201ENST00000492004 341 ntBASIC5.11□□□□□ -1.59
HMGCLP35914 RN7SL441P-201ENST00000492388 296 ntBASIC5.11□□□□□ -1.59
HMGCLP35914 AC093763.2-201ENST00000505334 1223 ntBASIC5.11□□□□□ -1.59
HMGCLP35914 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGCLP35914 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGCLP35914 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.11□□□□□ -1.59
HMGCLP35914 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGCLP35914 OR10D4P-201ENST00000525892 951 ntBASIC5.11□□□□□ -1.59
HMGCLP35914 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGCLP35914 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGCLP35914 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGCLP35914 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.11□□□□□ -1.59
HMGCLP35914 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.11□□□□□ -1.59
HMGCLP35914 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.11□□□□□ -1.59
HMGCLP35914 AL121612.2-201ENST00000612261 482 ntBASIC5.11□□□□□ -1.59
HMGCLP35914 AL450345.1-202ENST00000605741 3881 ntBASIC5.11□□□□□ -1.59
HMGCLP35914 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCLP35914 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HMGCLP35914 CR383656.5-201ENST00000547616 1340 ntBASIC5.11□□□□□ -1.59
HMGCLP35914 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCLP35914 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGCLP35914 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCLP35914 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCLP35914 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.11□□□□□ -1.59
HMGCLP35914 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HMGCLP35914 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HMGCLP35914 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.11□□□□□ -1.59
HMGCLP35914 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
HMGCLP35914 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HMGCLP35914 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms