Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC104333.2-201ENST00000422630 192 ntBASIC5.3□□□□□ -1.56
CISHQ9NSE2 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.3□□□□□ -1.56
CISHQ9NSE2 PSMD10P3-201ENST00000437000 448 ntBASIC5.3□□□□□ -1.56
CISHQ9NSE2 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.3□□□□□ -1.56
CISHQ9NSE2 AC073052.1-201ENST00000440417 714 ntBASIC5.3□□□□□ -1.56
CISHQ9NSE2 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.3□□□□□ -1.56
CISHQ9NSE2 SETP4-201ENST00000455717 868 ntBASIC5.3□□□□□ -1.56
CISHQ9NSE2 AC093166.2-201ENST00000455969 1017 ntBASIC5.3□□□□□ -1.56
CISHQ9NSE2 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.3□□□□□ -1.56
CISHQ9NSE2 AC140172.1-201ENST00000502928 141 ntBASIC5.3□□□□□ -1.56
CISHQ9NSE2 AC138832.1-201ENST00000522871 556 ntBASIC5.3□□□□□ -1.56
CISHQ9NSE2 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.3□□□□□ -1.56
CISHQ9NSE2 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.3□□□□□ -1.56
CISHQ9NSE2 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.3□□□□□ -1.56
CISHQ9NSE2 AC011840.5-201ENST00000582125 771 ntBASIC5.3□□□□□ -1.56
CISHQ9NSE2 AC010503.3-201ENST00000594355 540 ntBASIC5.3□□□□□ -1.56
CISHQ9NSE2 AC104687.2-201ENST00000604442 342 ntBASIC5.3□□□□□ -1.56
CISHQ9NSE2 AC008833.1-201ENST00000611633 691 ntBASIC5.3□□□□□ -1.56
CISHQ9NSE2 MIR7155-201ENST00000615925 56 ntBASIC5.3□□□□□ -1.56
CISHQ9NSE2 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.3□□□□□ -1.56
CISHQ9NSE2 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.3□□□□□ -1.56
CISHQ9NSE2 AC073869.10-201ENST00000642016 354 ntBASIC5.3□□□□□ -1.56
CISHQ9NSE2 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CISHQ9NSE2 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CISHQ9NSE2 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
CISHQ9NSE2 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CISHQ9NSE2 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CISHQ9NSE2 AC100778.3-201ENST00000580060 1750 ntBASIC5.29□□□□□ -1.56
CISHQ9NSE2 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CISHQ9NSE2 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.29□□□□□ -1.56
CISHQ9NSE2 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CISHQ9NSE2 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
CISHQ9NSE2 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CISHQ9NSE2 RN7SKP95-201ENST00000362860 303 ntBASIC5.29□□□□□ -1.56
CISHQ9NSE2 RNA5SP123-201ENST00000363244 119 ntBASIC5.29□□□□□ -1.56
CISHQ9NSE2 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.29□□□□□ -1.56
CISHQ9NSE2 AL645927.1-201ENST00000396783 406 ntBASIC5.29□□□□□ -1.56
CISHQ9NSE2 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CISHQ9NSE2 AL021331.1-201ENST00000402817 582 ntBASIC5.29□□□□□ -1.56
CISHQ9NSE2 AP002530.1-201ENST00000405705 684 ntBASIC5.29□□□□□ -1.56
CISHQ9NSE2 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.29□□□□□ -1.56
CISHQ9NSE2 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.29□□□□□ -1.56
CISHQ9NSE2 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.29□□□□□ -1.56
CISHQ9NSE2 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.29□□□□□ -1.56
CISHQ9NSE2 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.29□□□□□ -1.56
CISHQ9NSE2 snoU13.20-201ENST00000459180 104 ntBASIC5.29□□□□□ -1.56
CISHQ9NSE2 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.29□□□□□ -1.56
CISHQ9NSE2 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.29□□□□□ -1.56
CISHQ9NSE2 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CISHQ9NSE2 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CISHQ9NSE2 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.29□□□□□ -1.56
CISHQ9NSE2 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CISHQ9NSE2 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.29□□□□□ -1.56
CISHQ9NSE2 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.29□□□□□ -1.56
CISHQ9NSE2 TVP23CP2-201ENST00000571473 623 ntBASIC5.29□□□□□ -1.56
CISHQ9NSE2 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.29□□□□□ -1.56
CISHQ9NSE2 AL356752.1-201ENST00000615844 593 ntBASIC5.29□□□□□ -1.56
CISHQ9NSE2 AC068870.2-201ENST00000620635 389 ntBASIC5.29□□□□□ -1.56
CISHQ9NSE2 AC091905.4-201ENST00000623432 202 ntBASIC5.29□□□□□ -1.56
CISHQ9NSE2 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.29□□□□□ -1.56
CISHQ9NSE2 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.29□□□□□ -1.56
CISHQ9NSE2 AP000432.2-201ENST00000624164 2048 ntBASIC5.29□□□□□ -1.56
CISHQ9NSE2 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CISHQ9NSE2 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CISHQ9NSE2 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
CISHQ9NSE2 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.29□□□□□ -1.56
CISHQ9NSE2 AC018628.1-201ENST00000624147 3819 ntBASIC5.29□□□□□ -1.56
CISHQ9NSE2 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CISHQ9NSE2 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CISHQ9NSE2 CR383656.5-201ENST00000547616 1340 ntBASIC5.28□□□□□ -1.56
CISHQ9NSE2 AC005005.4-201ENST00000623789 16698 ntBASIC5.28□□□□□ -1.56
CISHQ9NSE2 AC090220.1-201ENST00000593078 1699 ntBASIC5.28□□□□□ -1.56
CISHQ9NSE2 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CISHQ9NSE2 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CISHQ9NSE2 RN7SKP104-201ENST00000362605 328 ntBASIC5.28□□□□□ -1.56
CISHQ9NSE2 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.28□□□□□ -1.56
CISHQ9NSE2 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CISHQ9NSE2 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CISHQ9NSE2 CHEK2P3-201ENST00000416118 248 ntBASIC5.28□□□□□ -1.56
CISHQ9NSE2 RPL7P11-201ENST00000437586 658 ntBASIC5.28□□□□□ -1.56
CISHQ9NSE2 TCEA1P3-201ENST00000443005 880 ntBASIC5.28□□□□□ -1.56
CISHQ9NSE2 TRY2P-201ENST00000448860 689 ntBASIC5.28□□□□□ -1.56
CISHQ9NSE2 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.28□□□□□ -1.56
CISHQ9NSE2 AL356981.1-201ENST00000454879 684 ntBASIC5.28□□□□□ -1.56
CISHQ9NSE2 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.28□□□□□ -1.56
CISHQ9NSE2 RN7SL97P-201ENST00000486780 299 ntBASIC5.28□□□□□ -1.56
CISHQ9NSE2 OR2A3P-201ENST00000493774 953 ntBASIC5.28□□□□□ -1.56
CISHQ9NSE2 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.28□□□□□ -1.56
CISHQ9NSE2 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.28□□□□□ -1.56
CISHQ9NSE2 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.28□□□□□ -1.56
CISHQ9NSE2 RPL23AP53-201ENST00000521854 457 ntBASIC5.28□□□□□ -1.56
CISHQ9NSE2 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CISHQ9NSE2 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.28□□□□□ -1.56
CISHQ9NSE2 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
CISHQ9NSE2 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.28□□□□□ -1.56
CISHQ9NSE2 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.28□□□□□ -1.56
CISHQ9NSE2 AC211433.2-201ENST00000608433 387 ntBASIC5.28□□□□□ -1.56
CISHQ9NSE2 AC019206.1-201ENST00000621938 425 ntBASIC5.28□□□□□ -1.56
CISHQ9NSE2 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
CISHQ9NSE2 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms