Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
EBF3Q9H4W6 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 AC011493.1-201ENST00000596753 1632 ntBASIC5.68□□□□□ -1.5
EBF3Q9H4W6 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 U3.2-201ENST00000362981 210 ntBASIC5.68□□□□□ -1.5
EBF3Q9H4W6 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 MIR765-201ENST00000390226 114 ntBASIC5.68□□□□□ -1.5
EBF3Q9H4W6 RNA5SP339-201ENST00000390987 122 ntBASIC5.68□□□□□ -1.5
EBF3Q9H4W6 AL589655.1-201ENST00000405398 482 ntBASIC5.68□□□□□ -1.5
EBF3Q9H4W6 UBE2V1P15-201ENST00000407776 448 ntBASIC5.68□□□□□ -1.5
EBF3Q9H4W6 AL512504.1-201ENST00000415494 778 ntBASIC5.68□□□□□ -1.5
EBF3Q9H4W6 OR2X1P-201ENST00000421144 687 ntBASIC5.68□□□□□ -1.5
EBF3Q9H4W6 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 NPM1P48-201ENST00000436002 853 ntBASIC5.68□□□□□ -1.5
EBF3Q9H4W6 RPL12P3-201ENST00000440080 396 ntBASIC5.68□□□□□ -1.5
EBF3Q9H4W6 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 RPL7AP6-201ENST00000477943 801 ntBASIC5.68□□□□□ -1.5
EBF3Q9H4W6 AC231760.1-201ENST00000498002 260 ntBASIC5.68□□□□□ -1.5
EBF3Q9H4W6 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 AC138832.1-201ENST00000522871 556 ntBASIC5.68□□□□□ -1.5
EBF3Q9H4W6 CIR1P1-201ENST00000524055 1133 ntBASIC5.68□□□□□ -1.5
EBF3Q9H4W6 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 OR11J2P-201ENST00000555298 907 ntBASIC5.68□□□□□ -1.5
EBF3Q9H4W6 MTND3P12-201ENST00000559068 328 ntBASIC5.68□□□□□ -1.5
EBF3Q9H4W6 AC012414.2-201ENST00000559474 187 ntBASIC5.68□□□□□ -1.5
EBF3Q9H4W6 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 AL163952.1-202ENST00000569625 600 ntBASIC5.68□□□□□ -1.5
EBF3Q9H4W6 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 AC112220.2-201ENST00000605513 533 ntBASIC5.68□□□□□ -1.5
EBF3Q9H4W6 AL133481.2-203ENST00000607558 139 ntBASIC5.68□□□□□ -1.5
EBF3Q9H4W6 AC097504.2-201ENST00000608088 454 ntBASIC5.68□□□□□ -1.5
EBF3Q9H4W6 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 AC010608.3-201ENST00000625048 527 ntBASIC5.68□□□□□ -1.5
EBF3Q9H4W6 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
EBF3Q9H4W6 AL132656.3-201ENST00000606384 1595 ntBASIC5.67□□□□□ -1.5
EBF3Q9H4W6 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 AL133388.1-201ENST00000404509 287 ntBASIC5.67□□□□□ -1.5
EBF3Q9H4W6 RPS3AP25-201ENST00000411660 793 ntBASIC5.67□□□□□ -1.5
EBF3Q9H4W6 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 DSTNP5-201ENST00000427921 523 ntBASIC5.67□□□□□ -1.5
EBF3Q9H4W6 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 CBX1P5-201ENST00000475330 559 ntBASIC5.67□□□□□ -1.5
EBF3Q9H4W6 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 GLUD1P3-202ENST00000508551 200 ntBASIC5.67□□□□□ -1.5
EBF3Q9H4W6 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 AC026782.2-201ENST00000510845 636 ntBASIC5.67□□□□□ -1.5
EBF3Q9H4W6 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 MIR4700-201ENST00000578311 74 ntBASIC5.67□□□□□ -1.5
EBF3Q9H4W6 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 MIR4660-201ENST00000583549 74 ntBASIC5.67□□□□□ -1.5
EBF3Q9H4W6 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.67□□□□□ -1.5
EBF3Q9H4W6 HIRAP1-201ENST00000605318 787 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms