Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 RNA5SP512-201ENST00000364550 120 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 RNY3P10-201ENST00000384764 102 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 RNU6-1320P-201ENST00000390838 107 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 RNU6-1269P-201ENST00000391139 107 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 RPS26P38-201ENST00000414476 348 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 MTCYBP38-201ENST00000417160 1123 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 BLOC1S2P1-201ENST00000428431 301 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 RPL31P54-201ENST00000429803 370 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 TRIM60P18-201ENST00000441518 828 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 AC245291.3-201ENST00000443400 292 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 ST13P20-201ENST00000447996 1065 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 RNU7-27P-201ENST00000459281 62 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 RNU6-599P-201ENST00000459383 107 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 RNU6-1193P-201ENST00000459461 107 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 AC092824.1-201ENST00000483524 576 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 RPS7P6-201ENST00000485777 579 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 RN7SL568P-201ENST00000493069 298 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 AL117692.1-201ENST00000494283 713 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 AC006499.4-201ENST00000510947 694 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 RNU6-405P-201ENST00000516637 110 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 DPPA3P2-201ENST00000553589 478 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 MTND1P15-201ENST00000579262 949 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 AC026898.1-201ENST00000586404 571 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 AC068276.1-201ENST00000605793 379 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 AC008498.1-201ENST00000613012 531 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 MIR7844-201ENST00000616161 122 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 U6.42-201ENST00000618440 107 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 AP001264.1-201ENST00000620602 703 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 RNU6-368P-201ENST00000620928 107 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 RNU6-538P-201ENST00000622329 107 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 AC124312.6-202ENST00000623624 418 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 AL139384.2-201ENST00000613809 3590 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 AC010624.4-201ENST00000597606 1351 ntBASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
ARHGEF39Q8N4T4 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 AC012020.1-201ENST00000624541 1728 ntBASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 LYARP1-201ENST00000436977 1501 ntBASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 AL121657.1-201ENST00000327215 531 ntBASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 OR52E6-202ENST00000379946 954 ntBASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 Y_RNA.408-201ENST00000383987 102 ntBASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 TMSB4XP8-201ENST00000402089 135 ntBASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 AL023284.3-201ENST00000407767 334 ntBASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 TMSB4XP6-201ENST00000415187 135 ntBASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 RPL21P50-201ENST00000417698 477 ntBASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 CYCSP46-201ENST00000423569 204 ntBASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 TMSB4XP1-201ENST00000424567 135 ntBASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.17□□□□□ -1.42
ARHGEF39Q8N4T4 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms