Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AL139805.1-201ENST00000407837 289 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 RN7SKP273-201ENST00000411392 314 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 ELOCP17-201ENST00000414751 326 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 OR6C64P-201ENST00000419708 825 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AL133325.1-201ENST00000421090 382 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 BX119917.1-201ENST00000432517 502 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AC245452.2-201ENST00000435222 392 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AC242426.1-201ENST00000435270 960 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 COX6CP2-201ENST00000444980 225 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 DEFA11P-201ENST00000446470 261 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 COX6CP18-201ENST00000448769 222 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 RPS7P6-201ENST00000485777 579 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AC091965.2-201ENST00000512324 613 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AC092851.1-201ENST00000535964 478 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AC008055.1-201ENST00000547032 609 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 PCNPP1-201ENST00000552501 511 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AC004232.1-201ENST00000571388 208 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 MIR4675-201ENST00000577898 77 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AC016727.1-205ENST00000605437 569 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AL365181.4-201ENST00000609800 547 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AL136097.3-201ENST00000611097 505 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AC025588.4-201ENST00000615802 908 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AC073968.1-201ENST00000618594 637 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AC018755.4-201ENST00000619715 454 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AC073348.1-201ENST00000623002 331 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AC011447.7-201ENST00000624228 1590 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 AC016745.2-201ENST00000608834 3443 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 SMG1P7-201ENST00000565246 2704 ntBASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
NPAS4Q8IUM7 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 AC107982.1-201ENST00000507171 1300 ntBASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 AL672167.1-206ENST00000356293 943 ntBASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 RNU6-500P-201ENST00000362349 107 ntBASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 OR5H15-201ENST00000383696 930 ntBASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 SNORA77.2-201ENST00000408571 112 ntBASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 AC048351.1-201ENST00000420064 602 ntBASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 DUTP4-201ENST00000424782 475 ntBASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 MTCO3P21-201ENST00000430791 643 ntBASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 AL513175.1-201ENST00000431492 780 ntBASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 MTATP6P13-201ENST00000438531 667 ntBASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 AMYP1-201ENST00000440059 1023 ntBASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 TXNP5-201ENST00000441043 315 ntBASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 AL137845.2-201ENST00000444292 988 ntBASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 SETP11-201ENST00000473027 690 ntBASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 RPL5P14-201ENST00000494197 878 ntBASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC7.09□□□□□ -1.27
NPAS4Q8IUM7 AC109471.1-201ENST00000511631 612 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms