Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 GAPDHP58-201ENST00000438477 1006 ntBASIC3.99□□□□□ -1.77
HIST1H1AQ02539 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 AC064862.4-201ENST00000442180 334 ntBASIC3.99□□□□□ -1.77
HIST1H1AQ02539 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 YWHAEP1-201ENST00000453697 763 ntBASIC3.99□□□□□ -1.77
HIST1H1AQ02539 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 AC007998.1-201ENST00000474156 672 ntBASIC3.99□□□□□ -1.77
HIST1H1AQ02539 RPL15P21-201ENST00000495592 567 ntBASIC3.99□□□□□ -1.77
HIST1H1AQ02539 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 TCP11X3P-202ENST00000514289 1254 ntBASIC3.99□□□□□ -1.77
HIST1H1AQ02539 AC107918.3-201ENST00000533272 382 ntBASIC3.99□□□□□ -1.77
HIST1H1AQ02539 AC027544.3-201ENST00000535082 757 ntBASIC3.99□□□□□ -1.77
HIST1H1AQ02539 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 MIR4675-201ENST00000577898 77 ntBASIC3.99□□□□□ -1.77
HIST1H1AQ02539 AC022884.2-201ENST00000578535 580 ntBASIC3.99□□□□□ -1.77
HIST1H1AQ02539 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 LINC00901.1-201ENST00000617252 152 ntBASIC3.99□□□□□ -1.77
HIST1H1AQ02539 CU639417.4-201ENST00000623928 207 ntBASIC3.99□□□□□ -1.77
HIST1H1AQ02539 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 ERVFRD-3-201ENST00000578561 1617 ntBASIC3.99□□□□□ -1.77
HIST1H1AQ02539 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
HIST1H1AQ02539 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 AC087190.4-201ENST00000574616 8334 ntBASIC3.98□□□□□ -1.77
HIST1H1AQ02539 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 VN2R3P-201ENST00000422626 1412 ntBASIC3.98□□□□□ -1.77
HIST1H1AQ02539 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 FGG-201ENST00000336098 1659 ntTSL 2 BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 AC139713.2-215ENST00000641428 5037 ntBASIC3.98□□□□□ -1.77
HIST1H1AQ02539 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 AL592182.3-201ENST00000642132 3304 ntBASIC3.98□□□□□ -1.77
HIST1H1AQ02539 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 AL133388.1-201ENST00000404509 287 ntBASIC3.98□□□□□ -1.77
HIST1H1AQ02539 BMS1P17-202ENST00000416720 316 ntBASIC3.98□□□□□ -1.77
HIST1H1AQ02539 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 RPS11P7-201ENST00000442125 465 ntBASIC3.98□□□□□ -1.77
HIST1H1AQ02539 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 AC084754.1-201ENST00000463466 464 ntBASIC3.98□□□□□ -1.77
HIST1H1AQ02539 RPL5P16-201ENST00000471467 790 ntBASIC3.98□□□□□ -1.77
HIST1H1AQ02539 AC008410.1-201ENST00000483777 339 ntBASIC3.98□□□□□ -1.77
HIST1H1AQ02539 RPL7P41-201ENST00000485823 957 ntBASIC3.98□□□□□ -1.77
HIST1H1AQ02539 RN7SL423P-201ENST00000486202 304 ntBASIC3.98□□□□□ -1.77
HIST1H1AQ02539 RNA5SP303-201ENST00000516192 130 ntBASIC3.98□□□□□ -1.77
HIST1H1AQ02539 AC022826.1-201ENST00000519383 805 ntBASIC3.98□□□□□ -1.77
HIST1H1AQ02539 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 DYNLL1P4-201ENST00000549314 266 ntBASIC3.98□□□□□ -1.77
HIST1H1AQ02539 AC015720.2-201ENST00000567709 334 ntBASIC3.98□□□□□ -1.77
HIST1H1AQ02539 NDUFA5P11-201ENST00000567995 343 ntBASIC3.98□□□□□ -1.77
HIST1H1AQ02539 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 AC008521.2-201ENST00000591021 259 ntBASIC3.98□□□□□ -1.77
HIST1H1AQ02539 GMFG-202ENST00000594700 397 ntTSL 2 BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 AP002884.5-201ENST00000595053 1132 ntBASIC3.98□□□□□ -1.77
HIST1H1AQ02539 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 AC005252.1-201ENST00000604518 1063 ntBASIC3.98□□□□□ -1.77
HIST1H1AQ02539 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 AC023421.1-201ENST00000590535 1785 ntBASIC3.98□□□□□ -1.77
HIST1H1AQ02539 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
HIST1H1AQ02539 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 DDX18P4-201ENST00000511690 1966 ntBASIC3.97□□□□□ -1.77
HIST1H1AQ02539 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
HIST1H1AQ02539 AC005294.1-201ENST00000355509 281 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 187.4 ms