Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.64□□□□□ -1.67
CDX1P47902 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.64□□□□□ -1.67
CDX1P47902 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.64□□□□□ -1.67
CDX1P47902 AC002553.2-201ENST00000453217 340 ntBASIC4.64□□□□□ -1.67
CDX1P47902 RPL10P17-201ENST00000453852 316 ntBASIC4.64□□□□□ -1.67
CDX1P47902 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.64□□□□□ -1.67
CDX1P47902 AC011476.1-201ENST00000466725 307 ntBASIC4.64□□□□□ -1.67
CDX1P47902 AC078857.1-201ENST00000469870 667 ntBASIC4.64□□□□□ -1.67
CDX1P47902 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDX1P47902 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDX1P47902 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.64□□□□□ -1.67
CDX1P47902 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDX1P47902 SNORA31.13-201ENST00000516624 135 ntBASIC4.64□□□□□ -1.67
CDX1P47902 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.64□□□□□ -1.67
CDX1P47902 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC4.64□□□□□ -1.67
CDX1P47902 AC013701.1-201ENST00000522657 465 ntBASIC4.64□□□□□ -1.67
CDX1P47902 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.64□□□□□ -1.67
CDX1P47902 CIR1P1-201ENST00000524055 1133 ntBASIC4.64□□□□□ -1.67
CDX1P47902 PCNAP4-201ENST00000532690 730 ntBASIC4.64□□□□□ -1.67
CDX1P47902 AC079600.1-201ENST00000550326 297 ntBASIC4.64□□□□□ -1.67
CDX1P47902 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.64□□□□□ -1.67
CDX1P47902 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.64□□□□□ -1.67
CDX1P47902 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.64□□□□□ -1.67
CDX1P47902 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.64□□□□□ -1.67
CDX1P47902 AC093510.2-201ENST00000562820 896 ntBASIC4.64□□□□□ -1.67
CDX1P47902 AC020978.7-201ENST00000575953 1187 ntBASIC4.64□□□□□ -1.67
CDX1P47902 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.64□□□□□ -1.67
CDX1P47902 MIR548Y-201ENST00000582739 110 ntBASIC4.64□□□□□ -1.67
CDX1P47902 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.64□□□□□ -1.67
CDX1P47902 AC006115.2-201ENST00000596823 202 ntBASIC4.64□□□□□ -1.67
CDX1P47902 AC092574.1-201ENST00000609771 420 ntBASIC4.64□□□□□ -1.67
CDX1P47902 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.64□□□□□ -1.67
CDX1P47902 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.64□□□□□ -1.67
CDX1P47902 AC097460.3-201ENST00000623099 442 ntBASIC4.64□□□□□ -1.67
CDX1P47902 AC010435.1-201ENST00000623353 1177 ntBASIC4.64□□□□□ -1.67
CDX1P47902 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.64□□□□□ -1.67
CDX1P47902 AC097372.4-201ENST00000625025 466 ntBASIC4.64□□□□□ -1.67
CDX1P47902 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDX1P47902 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDX1P47902 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
CDX1P47902 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDX1P47902 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.64□□□□□ -1.67
CDX1P47902 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CDX1P47902 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.64□□□□□ -1.67
CDX1P47902 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDX1P47902 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.64□□□□□ -1.67
CDX1P47902 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDX1P47902 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CDX1P47902 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDX1P47902 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CDX1P47902 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDX1P47902 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDX1P47902 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDX1P47902 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CDX1P47902 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDX1P47902 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CDX1P47902 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CDX1P47902 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDX1P47902 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.63□□□□□ -1.67
CDX1P47902 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CDX1P47902 SELENOWP1-201ENST00000322792 252 ntBASIC4.63□□□□□ -1.67
CDX1P47902 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CDX1P47902 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CDX1P47902 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CDX1P47902 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CDX1P47902 HMGB1P13-201ENST00000406019 642 ntBASIC4.63□□□□□ -1.67
CDX1P47902 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.63□□□□□ -1.67
CDX1P47902 AC048351.1-201ENST00000420064 602 ntBASIC4.63□□□□□ -1.67
CDX1P47902 RPS3P2-201ENST00000421346 701 ntBASIC4.63□□□□□ -1.67
CDX1P47902 IPPKP1-201ENST00000422501 768 ntBASIC4.63□□□□□ -1.67
CDX1P47902 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.63□□□□□ -1.67
CDX1P47902 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC4.63□□□□□ -1.67
CDX1P47902 AC009784.1-201ENST00000426484 460 ntBASIC4.63□□□□□ -1.67
CDX1P47902 RPS4XP16-201ENST00000427198 791 ntBASIC4.63□□□□□ -1.67
CDX1P47902 RPS29P14-201ENST00000431518 171 ntBASIC4.63□□□□□ -1.67
CDX1P47902 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.63□□□□□ -1.67
CDX1P47902 AP000949.1-201ENST00000438328 629 ntBASIC4.63□□□□□ -1.67
CDX1P47902 YWHAZP2-201ENST00000440317 728 ntBASIC4.63□□□□□ -1.67
CDX1P47902 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.63□□□□□ -1.67
CDX1P47902 AC073909.1-201ENST00000447112 999 ntBASIC4.63□□□□□ -1.67
CDX1P47902 AL162739.1-201ENST00000450606 307 ntBASIC4.63□□□□□ -1.67
CDX1P47902 AL354710.1-201ENST00000453641 246 ntBASIC4.63□□□□□ -1.67
CDX1P47902 HLA-DPA3-207ENST00000454398 229 ntBASIC4.63□□□□□ -1.67
CDX1P47902 RNA5SP103-201ENST00000459503 118 ntBASIC4.63□□□□□ -1.67
CDX1P47902 AC104164.1-201ENST00000460282 590 ntBASIC4.63□□□□□ -1.67
CDX1P47902 ABCC13-202ENST00000463099 3842 ntBASIC4.63□□□□□ -1.67
CDX1P47902 AC099521.1-201ENST00000482557 334 ntBASIC4.63□□□□□ -1.67
CDX1P47902 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CDX1P47902 AC008629.2-201ENST00000503783 483 ntBASIC4.63□□□□□ -1.67
CDX1P47902 AC006499.4-201ENST00000510947 694 ntBASIC4.63□□□□□ -1.67
CDX1P47902 AL671862.1-201ENST00000515851 349 ntBASIC4.63□□□□□ -1.67
CDX1P47902 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.63□□□□□ -1.67
CDX1P47902 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.63□□□□□ -1.67
CDX1P47902 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.63□□□□□ -1.67
CDX1P47902 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.63□□□□□ -1.67
CDX1P47902 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CDX1P47902 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.63□□□□□ -1.67
CDX1P47902 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC4.63□□□□□ -1.67
CDX1P47902 AC139697.1-201ENST00000548429 745 ntBASIC4.63□□□□□ -1.67
CDX1P47902 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms