Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC6.39□□□□□ -1.39
HLA-DOAP06340 RN7SKP287-201ENST00000516546 266 ntBASIC6.39□□□□□ -1.39
HLA-DOAP06340 RNU6-943P-201ENST00000516960 98 ntBASIC6.39□□□□□ -1.39
HLA-DOAP06340 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC6.39□□□□□ -1.39
HLA-DOAP06340 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.39□□□□□ -1.39
HLA-DOAP06340 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC6.39□□□□□ -1.39
HLA-DOAP06340 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.39□□□□□ -1.39
HLA-DOAP06340 AL445222.1-201ENST00000607259 628 ntBASIC6.39□□□□□ -1.39
HLA-DOAP06340 AC090527.3-201ENST00000619041 548 ntBASIC6.39□□□□□ -1.39
HLA-DOAP06340 AL445528.2-201ENST00000620582 470 ntBASIC6.39□□□□□ -1.39
HLA-DOAP06340 AC068870.2-201ENST00000620635 389 ntBASIC6.39□□□□□ -1.39
HLA-DOAP06340 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.39□□□□□ -1.39
HLA-DOAP06340 KYNUP3-201ENST00000574386 1341 ntBASIC6.39□□□□□ -1.39
HLA-DOAP06340 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
HLA-DOAP06340 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HLA-DOAP06340 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HLA-DOAP06340 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
HLA-DOAP06340 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
HLA-DOAP06340 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-DOAP06340 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
HLA-DOAP06340 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-DOAP06340 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-DOAP06340 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-DOAP06340 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-DOAP06340 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-DOAP06340 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-DOAP06340 MIR421-201ENST00000365696 85 ntBASIC6.38□□□□□ -1.39
HLA-DOAP06340 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
HLA-DOAP06340 MIR105-1-201ENST00000385222 81 ntBASIC6.38□□□□□ -1.39
HLA-DOAP06340 OR4K12P-201ENST00000406538 961 ntBASIC6.38□□□□□ -1.39
HLA-DOAP06340 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.38□□□□□ -1.39
HLA-DOAP06340 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.38□□□□□ -1.39
HLA-DOAP06340 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.38□□□□□ -1.39
HLA-DOAP06340 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC6.38□□□□□ -1.39
HLA-DOAP06340 LINC02210-201ENST00000444561 288 ntBASIC6.38□□□□□ -1.39
HLA-DOAP06340 MTND1P33-201ENST00000446251 917 ntBASIC6.38□□□□□ -1.39
HLA-DOAP06340 RN7SL826P-201ENST00000479724 288 ntBASIC6.38□□□□□ -1.39
HLA-DOAP06340 RPL7P40-201ENST00000481703 745 ntBASIC6.38□□□□□ -1.39
HLA-DOAP06340 RN7SL808P-201ENST00000496066 299 ntBASIC6.38□□□□□ -1.39
HLA-DOAP06340 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.38□□□□□ -1.39
HLA-DOAP06340 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC6.38□□□□□ -1.39
HLA-DOAP06340 MTCO3P27-201ENST00000514397 196 ntBASIC6.38□□□□□ -1.39
HLA-DOAP06340 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC6.38□□□□□ -1.39
HLA-DOAP06340 OR4A6P-201ENST00000534364 970 ntBASIC6.38□□□□□ -1.39
HLA-DOAP06340 AC023538.1-201ENST00000534576 736 ntBASIC6.38□□□□□ -1.39
HLA-DOAP06340 AC091515.1-201ENST00000548110 679 ntBASIC6.38□□□□□ -1.39
HLA-DOAP06340 AC074029.2-201ENST00000551045 634 ntBASIC6.38□□□□□ -1.39
HLA-DOAP06340 MTCO2P2-201ENST00000591258 225 ntBASIC6.38□□□□□ -1.39
HLA-DOAP06340 AP001160.4-201ENST00000596971 382 ntBASIC6.38□□□□□ -1.39
HLA-DOAP06340 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.38□□□□□ -1.39
HLA-DOAP06340 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.38□□□□□ -1.39
HLA-DOAP06340 AC093424.1-201ENST00000604999 338 ntBASIC6.38□□□□□ -1.39
HLA-DOAP06340 KATNBL1P5-201ENST00000605015 517 ntBASIC6.38□□□□□ -1.39
HLA-DOAP06340 AC079395.3-201ENST00000615161 484 ntBASIC6.38□□□□□ -1.39
HLA-DOAP06340 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-DOAP06340 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-DOAP06340 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-DOAP06340 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.38□□□□□ -1.39
HLA-DOAP06340 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HLA-DOAP06340 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.38□□□□□ -1.39
HLA-DOAP06340 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.38□□□□□ -1.39
HLA-DOAP06340 AL078621.3-201ENST00000623707 2042 ntBASIC6.38□□□□□ -1.39
HLA-DOAP06340 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
HLA-DOAP06340 AC104964.3-201ENST00000606115 2860 ntBASIC6.38□□□□□ -1.39
HLA-DOAP06340 MAPK10-270ENST00000641102 3538 ntBASIC6.38□□□□□ -1.39
HLA-DOAP06340 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DOAP06340 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.37□□□□□ -1.39
HLA-DOAP06340 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
HLA-DOAP06340 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.37□□□□□ -1.39
HLA-DOAP06340 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DOAP06340 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DOAP06340 AC053481.2-202ENST00000582394 1500 ntBASIC6.37□□□□□ -1.39
HLA-DOAP06340 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HLA-DOAP06340 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DOAP06340 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DOAP06340 SNORA17.1-201ENST00000362945 126 ntBASIC6.37□□□□□ -1.39
HLA-DOAP06340 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DOAP06340 AL451142.1-201ENST00000375867 775 ntBASIC6.37□□□□□ -1.39
HLA-DOAP06340 MIR937-201ENST00000401271 86 ntBASIC6.37□□□□□ -1.39
HLA-DOAP06340 RPL12P43-201ENST00000420608 499 ntBASIC6.37□□□□□ -1.39
HLA-DOAP06340 AC009506.2-201ENST00000420635 840 ntBASIC6.37□□□□□ -1.39
HLA-DOAP06340 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-DOAP06340 AL590399.2-201ENST00000427536 309 ntBASIC6.37□□□□□ -1.39
HLA-DOAP06340 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.37□□□□□ -1.39
HLA-DOAP06340 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HLA-DOAP06340 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.37□□□□□ -1.39
HLA-DOAP06340 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.37□□□□□ -1.39
HLA-DOAP06340 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC6.37□□□□□ -1.39
HLA-DOAP06340 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC6.37□□□□□ -1.39
HLA-DOAP06340 SBDSP1-204ENST00000453858 737 ntBASIC6.37□□□□□ -1.39
HLA-DOAP06340 RPL23AP73-201ENST00000492507 471 ntBASIC6.37□□□□□ -1.39
HLA-DOAP06340 RPS4XP20-201ENST00000505751 772 ntBASIC6.37□□□□□ -1.39
HLA-DOAP06340 PRELID3BP5-201ENST00000508612 460 ntBASIC6.37□□□□□ -1.39
HLA-DOAP06340 AC005000.1-201ENST00000536192 288 ntBASIC6.37□□□□□ -1.39
HLA-DOAP06340 YWHABP2-201ENST00000540201 713 ntBASIC6.37□□□□□ -1.39
HLA-DOAP06340 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HLA-DOAP06340 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.37□□□□□ -1.39
HLA-DOAP06340 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.37□□□□□ -1.39
HLA-DOAP06340 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.37□□□□□ -1.39
HLA-DOAP06340 OR11J2P-201ENST00000555298 907 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms