Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.35□□□□□ -1.71
CD74P04233 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD74P04233 AP002373.2-201ENST00000541631 1060 ntBASIC4.35□□□□□ -1.71
CD74P04233 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.35□□□□□ -1.71
CD74P04233 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.35□□□□□ -1.71
CD74P04233 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.35□□□□□ -1.71
CD74P04233 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.35□□□□□ -1.71
CD74P04233 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.35□□□□□ -1.71
CD74P04233 AC060766.1-201ENST00000590824 627 ntBASIC4.35□□□□□ -1.71
CD74P04233 AC015849.6-201ENST00000605454 474 ntBASIC4.35□□□□□ -1.71
CD74P04233 AL353600.1-201ENST00000608148 251 ntBASIC4.35□□□□□ -1.71
CD74P04233 AL096712.1-201ENST00000614561 159 ntBASIC4.35□□□□□ -1.71
CD74P04233 AL356752.1-201ENST00000615844 593 ntBASIC4.35□□□□□ -1.71
CD74P04233 AL512356.3-201ENST00000623005 461 ntBASIC4.35□□□□□ -1.71
CD74P04233 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.35□□□□□ -1.71
CD74P04233 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.35□□□□□ -1.71
CD74P04233 AL596275.2-204ENST00000641628 552 ntBASIC4.35□□□□□ -1.71
CD74P04233 AL596275.2-206ENST00000641957 626 ntBASIC4.35□□□□□ -1.71
CD74P04233 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD74P04233 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CD74P04233 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD74P04233 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.35□□□□□ -1.71
CD74P04233 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.35□□□□□ -1.71
CD74P04233 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CD74P04233 YES1P1-201ENST00000418510 1628 ntBASIC4.35□□□□□ -1.71
CD74P04233 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CD74P04233 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.35□□□□□ -1.71
CD74P04233 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CD74P04233 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CD74P04233 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CD74P04233 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CD74P04233 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CD74P04233 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CD74P04233 AL022322.2-201ENST00000624072 20397 ntBASIC4.34□□□□□ -1.71
CD74P04233 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CD74P04233 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CD74P04233 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CD74P04233 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CD74P04233 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.34□□□□□ -1.71
CD74P04233 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CD74P04233 OR8V1P-201ENST00000395193 873 ntBASIC4.34□□□□□ -1.71
CD74P04233 AP000580.1-201ENST00000404439 358 ntBASIC4.34□□□□□ -1.71
CD74P04233 HMGN1P20-201ENST00000411849 300 ntBASIC4.34□□□□□ -1.71
CD74P04233 PPP2R2DP1-201ENST00000420526 637 ntBASIC4.34□□□□□ -1.71
CD74P04233 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.34□□□□□ -1.71
CD74P04233 RPS29P14-201ENST00000431518 171 ntBASIC4.34□□□□□ -1.71
CD74P04233 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.34□□□□□ -1.71
CD74P04233 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.34□□□□□ -1.71
CD74P04233 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.34□□□□□ -1.71
CD74P04233 AC019185.1-201ENST00000442718 389 ntBASIC4.34□□□□□ -1.71
CD74P04233 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.34□□□□□ -1.71
CD74P04233 AC105399.1-202ENST00000447303 205 ntBASIC4.34□□□□□ -1.71
CD74P04233 AC084754.1-201ENST00000463466 464 ntBASIC4.34□□□□□ -1.71
CD74P04233 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.34□□□□□ -1.71
CD74P04233 RN7SL441P-201ENST00000492388 296 ntBASIC4.34□□□□□ -1.71
CD74P04233 AC025458.1-201ENST00000506046 166 ntBASIC4.34□□□□□ -1.71
CD74P04233 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.34□□□□□ -1.71
CD74P04233 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.34□□□□□ -1.71
CD74P04233 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.34□□□□□ -1.71
CD74P04233 NRBF2P4-201ENST00000520874 850 ntBASIC4.34□□□□□ -1.71
CD74P04233 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.34□□□□□ -1.71
CD74P04233 TRIM77BP-201ENST00000524985 1119 ntBASIC4.34□□□□□ -1.71
CD74P04233 AC078878.1-201ENST00000539832 958 ntBASIC4.34□□□□□ -1.71
CD74P04233 NANOGNBP2-201ENST00000544753 553 ntBASIC4.34□□□□□ -1.71
CD74P04233 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.34□□□□□ -1.71
CD74P04233 AL512310.9-201ENST00000553311 948 ntBASIC4.34□□□□□ -1.71
CD74P04233 NDUFB4P11-201ENST00000560510 395 ntBASIC4.34□□□□□ -1.71
CD74P04233 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CD74P04233 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CD74P04233 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.34□□□□□ -1.71
CD74P04233 BNIP3P35-201ENST00000604530 490 ntBASIC4.34□□□□□ -1.71
CD74P04233 AL713998.2-201ENST00000604538 1198 ntBASIC4.34□□□□□ -1.71
CD74P04233 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.34□□□□□ -1.71
CD74P04233 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.34□□□□□ -1.71
CD74P04233 AC097505.1-201ENST00000610199 565 ntBASIC4.34□□□□□ -1.71
CD74P04233 AC129778.1-202ENST00000623812 261 ntBASIC4.34□□□□□ -1.71
CD74P04233 AL591379.1-207ENST00000635982 261 ntBASIC4.34□□□□□ -1.71
CD74P04233 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.34□□□□□ -1.71
CD74P04233 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CD74P04233 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.34□□□□□ -1.71
CD74P04233 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.34□□□□□ -1.71
CD74P04233 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
CD74P04233 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CD74P04233 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.34□□□□□ -1.72
CD74P04233 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CD74P04233 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
CD74P04233 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CD74P04233 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
CD74P04233 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.33□□□□□ -1.72
CD74P04233 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CD74P04233 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CD74P04233 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.33□□□□□ -1.72
CD74P04233 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CD74P04233 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CD74P04233 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.33□□□□□ -1.72
CD74P04233 CUL4AP1-201ENST00000514750 1863 ntBASIC4.33□□□□□ -1.72
CD74P04233 HCFC2P1-201ENST00000392864 1592 ntBASIC4.33□□□□□ -1.72
CD74P04233 AL133268.1-201ENST00000405676 1401 ntBASIC4.33□□□□□ -1.72
CD74P04233 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CD74P04233 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 140.6 ms