Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 LINC01808-202ENST00000641680 1116 ntBASIC6.42□□□□□ -1.38
PPARGC1AQ9UBK2 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
PPARGC1AQ9UBK2 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PPARGC1AQ9UBK2 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
PPARGC1AQ9UBK2 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
PPARGC1AQ9UBK2 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.42□□□□□ -1.38
PPARGC1AQ9UBK2 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.42□□□□□ -1.38
PPARGC1AQ9UBK2 MTND4P4-201ENST00000439033 1366 ntBASIC6.42□□□□□ -1.38
PPARGC1AQ9UBK2 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
PPARGC1AQ9UBK2 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PPARGC1AQ9UBK2 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PPARGC1AQ9UBK2 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
PPARGC1AQ9UBK2 AC024651.2-201ENST00000562480 2098 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AC073055.1-201ENST00000456901 1621 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 Y_RNA.51-201ENST00000362725 102 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 RNA5SP27-201ENST00000363839 119 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 ATP5HP3-201ENST00000396994 486 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 RPS3AP26-201ENST00000398259 784 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 OR2W4P-201ENST00000406496 926 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AC006065.1-201ENST00000422539 802 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AC234781.2-201ENST00000426370 994 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 MTND1P32-201ENST00000433043 938 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AC098826.1-201ENST00000433943 471 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 GAPDHP23-201ENST00000444823 993 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AC093166.3-201ENST00000448785 303 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AC009961.3-201ENST00000449832 765 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 RPS27AP3-201ENST00000453803 454 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AC103563.5-201ENST00000455643 364 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AC019084.1-201ENST00000457337 432 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 RN7SL221P-201ENST00000466190 281 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 OR6M2P-201ENST00000529831 871 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 OR11H3P-201ENST00000554547 982 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AC134669.1-201ENST00000581275 672 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AP002884.5-201ENST00000595053 1132 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AL590229.1-201ENST00000603497 542 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AL021368.3-201ENST00000607119 578 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 MIR6806-201ENST00000622141 64 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AC117409.1-201ENST00000470499 1310 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AC005725.1-201ENST00000577346 2607 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AL359976.1-201ENST00000418655 3528 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 AC006042.3-201ENST00000454684 1469 ntBASIC6.41□□□□□ -1.38
PPARGC1AQ9UBK2 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PPARGC1AQ9UBK2 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PPARGC1AQ9UBK2 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.4□□□□□ -1.38
PPARGC1AQ9UBK2 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.4□□□□□ -1.38
PPARGC1AQ9UBK2 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
PPARGC1AQ9UBK2 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PPARGC1AQ9UBK2 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
PPARGC1AQ9UBK2 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
PPARGC1AQ9UBK2 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
PPARGC1AQ9UBK2 SNORA43.1-201ENST00000364863 140 ntBASIC6.4□□□□□ -1.38
PPARGC1AQ9UBK2 RNA5SP279-201ENST00000365513 117 ntBASIC6.4□□□□□ -1.38
PPARGC1AQ9UBK2 SNORD116.1-201ENST00000365628 92 ntBASIC6.4□□□□□ -1.38
PPARGC1AQ9UBK2 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC6.4□□□□□ -1.38
PPARGC1AQ9UBK2 RNA5SP105-201ENST00000391123 113 ntBASIC6.4□□□□□ -1.38
PPARGC1AQ9UBK2 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC6.4□□□□□ -1.38
PPARGC1AQ9UBK2 AL034403.1-201ENST00000399414 885 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms