Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 AC009784.1-201ENST00000426484 460 ntBASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 AC090018.1-201ENST00000434369 367 ntBASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 VN1R54P-201ENST00000435210 1049 ntBASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 AC092647.3-201ENST00000443044 633 ntBASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 AC016772.1-201ENST00000444170 1261 ntBASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 NOP56P2-201ENST00000447491 769 ntBASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 RPS12P31-201ENST00000491419 398 ntBASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 AC138409.2-202ENST00000507274 458 ntBASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 AC110775.1-201ENST00000513721 462 ntBASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 RNU6-943P-201ENST00000516960 98 ntBASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 AC019322.1-201ENST00000571869 389 ntBASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 AC008536.1-201ENST00000602872 669 ntBASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 AC024940.4-201ENST00000605507 246 ntBASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 AC133644.2-201ENST00000608142 540 ntBASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 AC007786.3-201ENST00000615154 596 ntBASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 AC015660.5-201ENST00000623238 564 ntBASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 AC023421.1-201ENST00000590535 1785 ntBASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 AC131971.1-201ENST00000332881 1482 ntBASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 AC093849.1-201ENST00000563631 2209 ntBASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 RMST-209ENST00000639542 3269 ntTSL 5 BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 RNU1-74P-201ENST00000384108 171 ntBASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 SNORA5.1-201ENST00000384275 131 ntBASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 BX276092.6-201ENST00000430476 250 ntBASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 KNOP1P3-201ENST00000446933 426 ntBASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 NDUFA5P8-201ENST00000449019 346 ntBASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 RPL7P61-201ENST00000451721 751 ntBASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 BX276092.8-201ENST00000455722 250 ntBASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 RN7SL814P-201ENST00000487715 300 ntBASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 RNU4-18P-201ENST00000516751 149 ntBASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 KCTD9P6-201ENST00000522306 950 ntBASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 AC010547.7-201ENST00000570323 333 ntBASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 AC011626.1-201ENST00000604710 562 ntBASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 AC004948.1-201ENST00000609858 672 ntBASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 AC093799.2-201ENST00000610062 578 ntBASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 AC096586.2-201ENST00000610260 441 ntBASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 ABCC13-202ENST00000463099 3842 ntBASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLCF1Q9UBD9 AC006210.2-201ENST00000367074 1545 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 188.2 ms