Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AL121886.1-201ENST00000358609 435 ntBASIC4.77□□□□□ -1.65
CHD8Q9HCK8 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 AC096921.1-201ENST00000411661 375 ntBASIC4.77□□□□□ -1.65
CHD8Q9HCK8 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 HSFY6P-201ENST00000445573 403 ntBASIC4.77□□□□□ -1.65
CHD8Q9HCK8 ENPP7P9-201ENST00000514456 627 ntBASIC4.77□□□□□ -1.65
CHD8Q9HCK8 RNA5SP392-201ENST00000516905 112 ntBASIC4.77□□□□□ -1.65
CHD8Q9HCK8 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 ZYXP1-201ENST00000617638 118 ntBASIC4.77□□□□□ -1.65
CHD8Q9HCK8 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 AL731566.1-201ENST00000620490 1937 ntBASIC4.77□□□□□ -1.65
CHD8Q9HCK8 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
CHD8Q9HCK8 Y_RNA.500-201ENST00000384466 111 ntBASIC4.76□□□□□ -1.65
CHD8Q9HCK8 ATP5F1P2-201ENST00000398143 760 ntBASIC4.76□□□□□ -1.65
CHD8Q9HCK8 RN7SKP106-201ENST00000410832 272 ntBASIC4.76□□□□□ -1.65
CHD8Q9HCK8 AF186996.5-201ENST00000418098 904 ntBASIC4.76□□□□□ -1.65
CHD8Q9HCK8 AL731534.1-201ENST00000434711 269 ntBASIC4.76□□□□□ -1.65
CHD8Q9HCK8 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.76□□□□□ -1.65
CHD8Q9HCK8 OR13C1P-201ENST00000457612 963 ntBASIC4.76□□□□□ -1.65
CHD8Q9HCK8 AC108064.1-201ENST00000513791 460 ntBASIC4.76□□□□□ -1.65
CHD8Q9HCK8 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHD8Q9HCK8 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHD8Q9HCK8 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.76□□□□□ -1.65
CHD8Q9HCK8 AC013470.2-202ENST00000635746 1895 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CHD8Q9HCK8 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC4.76□□□□□ -1.65
CHD8Q9HCK8 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CHD8Q9HCK8 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CHD8Q9HCK8 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.76□□□□□ -1.65
CHD8Q9HCK8 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC4.76□□□□□ -1.65
CHD8Q9HCK8 NANOGP9-201ENST00000439890 892 ntBASIC4.76□□□□□ -1.65
CHD8Q9HCK8 SCARNA22-201ENST00000503991 125 ntBASIC4.76□□□□□ -1.65
CHD8Q9HCK8 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC4.76□□□□□ -1.65
CHD8Q9HCK8 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.76□□□□□ -1.65
CHD8Q9HCK8 AC114781.5-201ENST00000615297 108 ntBASIC4.76□□□□□ -1.65
CHD8Q9HCK8 TCL6_3.1-201ENST00000619064 137 ntBASIC4.76□□□□□ -1.65
CHD8Q9HCK8 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.76□□□□□ -1.65
CHD8Q9HCK8 AC073869.8-201ENST00000641806 335 ntBASIC4.76□□□□□ -1.65
CHD8Q9HCK8 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CHD8Q9HCK8 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CHD8Q9HCK8 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
CHD8Q9HCK8 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC4.76□□□□□ -1.65
CHD8Q9HCK8 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CHD8Q9HCK8 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHD8Q9HCK8 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CHD8Q9HCK8 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHD8Q9HCK8 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CHD8Q9HCK8 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 RPS3AP25-201ENST00000411660 793 ntBASIC4.75□□□□□ -1.65
CHD8Q9HCK8 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 AC016027.5-201ENST00000427227 210 ntBASIC4.75□□□□□ -1.65
CHD8Q9HCK8 RPL34P27-201ENST00000428810 349 ntBASIC4.75□□□□□ -1.65
CHD8Q9HCK8 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 AL163952.1-202ENST00000569625 600 ntBASIC4.75□□□□□ -1.65
CHD8Q9HCK8 AC005191.1-201ENST00000603950 358 ntBASIC4.75□□□□□ -1.65
CHD8Q9HCK8 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 AL391261.1-201ENST00000555712 1479 ntBASIC4.75□□□□□ -1.65
CHD8Q9HCK8 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 AC005618.1-201ENST00000606901 3148 ntBASIC4.75□□□□□ -1.65
CHD8Q9HCK8 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 RPL37P1-201ENST00000432310 284 ntBASIC4.75□□□□□ -1.65
CHD8Q9HCK8 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 AC012400.1-201ENST00000518452 381 ntBASIC4.75□□□□□ -1.65
CHD8Q9HCK8 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CHD8Q9HCK8 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 AC062029.1-202ENST00000606164 3651 ntBASIC4.74□□□□□ -1.65
CHD8Q9HCK8 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.74□□□□□ -1.65
CHD8Q9HCK8 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms