Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SEC61A2Q9H9S3 AC005225.5-201ENST00000623547 2225 ntBASIC5.75□□□□□ -1.49
SEC61A2Q9H9S3 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SEC61A2Q9H9S3 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
SEC61A2Q9H9S3 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SEC61A2Q9H9S3 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SEC61A2Q9H9S3 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC5.75□□□□□ -1.49
SEC61A2Q9H9S3 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SEC61A2Q9H9S3 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AC004520.1-201ENST00000608362 1413 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 MTCO1P28-201ENST00000574177 1528 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 OR56B2P-201ENST00000317102 954 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 ATP5F1P4-201ENST00000397288 746 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 RPL5P20-201ENST00000403848 896 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 MTND1P21-201ENST00000412991 285 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AC016831.2-201ENST00000417179 352 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 RPL21P43-201ENST00000425440 472 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 ETF1P3-201ENST00000430422 1160 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 LDHAP2-201ENST00000437325 985 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AC092641.1-201ENST00000440229 772 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AC009263.1-201ENST00000441193 1239 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 DNAJC19P5-201ENST00000443295 316 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AC099670.1-201ENST00000455141 783 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 SUMO2P2-201ENST00000456482 255 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 CFTRP1-201ENST00000456646 183 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 RN7SL836P-201ENST00000476140 296 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 OR7E157P-201ENST00000494376 911 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AC004069.2-201ENST00000505438 1114 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AC093870.1-201ENST00000506837 213 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AC026782.2-201ENST00000510845 636 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 GTF2F2P1-201ENST00000511083 675 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AC116917.1-201ENST00000520558 305 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 HIGD1AP18-201ENST00000520730 278 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 OR4R3P-201ENST00000525084 838 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AC092718.4-201ENST00000566639 716 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 MIR3157-201ENST00000578688 85 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 MIR4420-201ENST00000583944 77 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AC100767.2-201ENST00000604840 693 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AL592494.3-201ENST00000609485 464 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AC024941.1-201ENST00000612250 334 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 MIR6085-201ENST00000618314 110 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AC009509.4-201ENST00000619202 509 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 NEPNP-201ENST00000404786 1371 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 CR848007.1-201ENST00000442354 1699 ntBASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SEC61A2Q9H9S3 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms