Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 TRGV5P-201ENST00000419915 354 ntBASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 HMGB1P32-201ENST00000425971 565 ntBASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 NDUFA5P8-201ENST00000449019 346 ntBASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 AC022884.2-201ENST00000578535 580 ntBASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 AC091905.4-201ENST00000623432 202 ntBASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 AC135068.12-201ENST00000637370 931 ntBASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.27□□□□□ -1.41
RPAP1Q9BWH6 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 FAR2P2-201ENST00000413041 594 ntBASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 FAR2P4-202ENST00000425399 584 ntBASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 RPL21P133-201ENST00000443666 476 ntBASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 KNOP1P3-201ENST00000446933 426 ntBASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 AC245028.2-201ENST00000458673 253 ntBASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 CEACAMP10-202ENST00000495431 496 ntBASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 AC093890.1-201ENST00000502554 540 ntBASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 MYL12BP2-201ENST00000503948 512 ntBASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 AC018690.1-201ENST00000608144 626 ntBASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 AP005432.2-201ENST00000608162 586 ntBASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
RPAP1Q9BWH6 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 SMG1P7-201ENST00000565246 2704 ntBASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 OR9K1P-202ENST00000641111 3217 ntBASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 RNA5SP123-201ENST00000363244 119 ntBASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 RNA5SP90-201ENST00000364801 99 ntBASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 AL353625.1-202ENST00000366273 571 ntBASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 AL049745.1-201ENST00000433953 286 ntBASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 TCEA1P3-201ENST00000443005 880 ntBASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 AC137768.1-201ENST00000549998 553 ntBASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 EDDM3DP-201ENST00000554692 434 ntBASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 MIR4330-201ENST00000579077 105 ntBASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 OR51C1P-201ENST00000608504 942 ntBASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 AC105105.5-201ENST00000622635 1294 ntBASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
RPAP1Q9BWH6 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
RPAP1Q9BWH6 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RPAP1Q9BWH6 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
RPAP1Q9BWH6 NXF4-202ENST00000416098 1465 ntBASIC6.24□□□□□ -1.41
RPAP1Q9BWH6 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
RPAP1Q9BWH6 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
RPAP1Q9BWH6 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.24□□□□□ -1.41
RPAP1Q9BWH6 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.24□□□□□ -1.41
RPAP1Q9BWH6 COX6B1P1-201ENST00000415962 213 ntBASIC6.24□□□□□ -1.41
RPAP1Q9BWH6 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.24□□□□□ -1.41
RPAP1Q9BWH6 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC6.24□□□□□ -1.41
RPAP1Q9BWH6 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC6.24□□□□□ -1.41
RPAP1Q9BWH6 FTH1P2-201ENST00000466086 412 ntBASIC6.24□□□□□ -1.41
RPAP1Q9BWH6 IGLV2-34-201ENST00000490007 283 ntBASIC6.24□□□□□ -1.41
RPAP1Q9BWH6 AC063949.1-201ENST00000552900 865 ntBASIC6.24□□□□□ -1.41
RPAP1Q9BWH6 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms