Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 IPPKP1-201ENST00000422501 768 ntBASIC5.69□□□□□ -1.5
VPS50Q96JG6 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 AL160175.1-201ENST00000428124 247 ntBASIC5.69□□□□□ -1.5
VPS50Q96JG6 RPS29P14-201ENST00000431518 171 ntBASIC5.69□□□□□ -1.5
VPS50Q96JG6 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VPS50Q96JG6 AL138787.1-202ENST00000437804 898 ntBASIC5.69□□□□□ -1.5
VPS50Q96JG6 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 AC044797.1-201ENST00000445744 679 ntBASIC5.69□□□□□ -1.5
VPS50Q96JG6 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 RPS4XP12-201ENST00000461747 709 ntBASIC5.69□□□□□ -1.5
VPS50Q96JG6 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VPS50Q96JG6 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 LARP7P4-201ENST00000481075 878 ntBASIC5.69□□□□□ -1.5
VPS50Q96JG6 EIF3LP3-201ENST00000495197 822 ntBASIC5.69□□□□□ -1.5
VPS50Q96JG6 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS50Q96JG6 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 AC060780.2-201ENST00000589047 198 ntBASIC5.69□□□□□ -1.5
VPS50Q96JG6 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 AL159169.2-201ENST00000610061 1269 ntBASIC5.69□□□□□ -1.5
VPS50Q96JG6 AC004908.3-201ENST00000610248 625 ntBASIC5.69□□□□□ -1.5
VPS50Q96JG6 RNU6-1192P-201ENST00000612197 107 ntBASIC5.69□□□□□ -1.5
VPS50Q96JG6 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.69□□□□□ -1.5
VPS50Q96JG6 AC096861.1-201ENST00000616652 240 ntBASIC5.69□□□□□ -1.5
VPS50Q96JG6 RNU6-489P-201ENST00000618289 107 ntBASIC5.69□□□□□ -1.5
VPS50Q96JG6 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS50Q96JG6 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VPS50Q96JG6 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS50Q96JG6 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
VPS50Q96JG6 AL359715.3-201ENST00000569267 2123 ntBASIC5.69□□□□□ -1.5
VPS50Q96JG6 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS50Q96JG6 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
VPS50Q96JG6 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS50Q96JG6 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS50Q96JG6 RN7SKP128-201ENST00000364270 303 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 RNU6-468P-201ENST00000384003 109 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 AC016739.1-201ENST00000405359 345 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 RNA5SP178-201ENST00000410380 128 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 AL096829.1-201ENST00000413677 457 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 NENFP1-201ENST00000419476 466 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 MTCYBP7-201ENST00000419540 1134 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 RPS15AP30-201ENST00000420976 390 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 MTCO1P43-201ENST00000431831 488 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 AC138761.5-201ENST00000433967 325 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 CUBNP2-201ENST00000443534 1139 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 AL445466.1-201ENST00000448432 357 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 RPL31P15-201ENST00000449770 338 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 RBMY2TP-201ENST00000451162 947 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS50Q96JG6 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 SYT14P1-201ENST00000481459 721 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 GAPDHP71-201ENST00000511530 1003 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 OR5H7P-201ENST00000514084 930 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 RN7SKP288-201ENST00000516227 268 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 RN7SKP265-201ENST00000516448 223 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 IGLVIV-64-201ENST00000518581 301 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 NPM1P35-201ENST00000533043 868 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 AP000916.1-201ENST00000533869 835 ntBASIC5.68□□□□□ -1.5
VPS50Q96JG6 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS50Q96JG6 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms