Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RNF43Q68DV7 AL355852.1-201ENST00000454081 1771 ntBASIC6.96□□□□□ -1.3
RNF43Q68DV7 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
RNF43Q68DV7 AL391994.1-201ENST00000254724 282 ntBASIC6.96□□□□□ -1.3
RNF43Q68DV7 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
RNF43Q68DV7 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
RNF43Q68DV7 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RNF43Q68DV7 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
RNF43Q68DV7 OR4K6P-201ENST00000416478 897 ntBASIC6.96□□□□□ -1.3
RNF43Q68DV7 DNAJA1P2-201ENST00000421360 1197 ntBASIC6.96□□□□□ -1.3
RNF43Q68DV7 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.96□□□□□ -1.3
RNF43Q68DV7 RPS4XP16-201ENST00000427198 791 ntBASIC6.96□□□□□ -1.3
RNF43Q68DV7 MED14P1-201ENST00000430517 648 ntBASIC6.96□□□□□ -1.3
RNF43Q68DV7 HSD52-202ENST00000436225 772 ntTSL 3 BASIC6.96□□□□□ -1.3
RNF43Q68DV7 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.96□□□□□ -1.3
RNF43Q68DV7 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RNF43Q68DV7 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RNF43Q68DV7 MTCO3P18-201ENST00000440206 761 ntBASIC6.96□□□□□ -1.3
RNF43Q68DV7 AL137845.2-201ENST00000444292 988 ntBASIC6.96□□□□□ -1.3
RNF43Q68DV7 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC6.96□□□□□ -1.3
RNF43Q68DV7 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.96□□□□□ -1.3
RNF43Q68DV7 CCDC75P1-201ENST00000469247 791 ntBASIC6.96□□□□□ -1.3
RNF43Q68DV7 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.96□□□□□ -1.3
RNF43Q68DV7 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF43Q68DV7 HPRT1P2-201ENST00000505250 544 ntBASIC6.96□□□□□ -1.3
RNF43Q68DV7 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF43Q68DV7 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC6.96□□□□□ -1.3
RNF43Q68DV7 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC6.96□□□□□ -1.3
RNF43Q68DV7 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF43Q68DV7 AC024589.1-201ENST00000512207 263 ntBASIC6.96□□□□□ -1.3
RNF43Q68DV7 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RNF43Q68DV7 RNU6-964P-201ENST00000516524 69 ntBASIC6.96□□□□□ -1.3
RNF43Q68DV7 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC6.96□□□□□ -1.3
RNF43Q68DV7 SNRPCP6-201ENST00000528310 210 ntBASIC6.96□□□□□ -1.3
RNF43Q68DV7 AC074029.1-201ENST00000552531 1044 ntBASIC6.96□□□□□ -1.3
RNF43Q68DV7 AC005519.1-201ENST00000554490 601 ntBASIC6.96□□□□□ -1.3
RNF43Q68DV7 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC6.96□□□□□ -1.3
RNF43Q68DV7 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.96□□□□□ -1.3
RNF43Q68DV7 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.96□□□□□ -1.3
RNF43Q68DV7 AADACP1-206ENST00000561502 1193 ntBASIC6.96□□□□□ -1.3
RNF43Q68DV7 VN1R81P-201ENST00000602085 372 ntBASIC6.96□□□□□ -1.3
RNF43Q68DV7 AL390208.1-201ENST00000605885 644 ntBASIC6.96□□□□□ -1.3
RNF43Q68DV7 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.96□□□□□ -1.3
RNF43Q68DV7 OR1N1-202ENST00000619659 939 ntBASIC6.96□□□□□ -1.3
RNF43Q68DV7 SNX18P10-201ENST00000625014 519 ntBASIC6.96□□□□□ -1.3
RNF43Q68DV7 AC027559.1-201ENST00000636288 271 ntBASIC6.96□□□□□ -1.3
RNF43Q68DV7 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
RNF43Q68DV7 AC073365.1-203ENST00000641055 1992 ntBASIC6.96□□□□□ -1.3
RNF43Q68DV7 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RNF43Q68DV7 CNOT6LP1-201ENST00000559681 1462 ntBASIC6.96□□□□□ -1.3
RNF43Q68DV7 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RNF43Q68DV7 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RNF43Q68DV7 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
RNF43Q68DV7 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RNF43Q68DV7 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
RNF43Q68DV7 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC6.96□□□□□ -1.3
RNF43Q68DV7 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF43Q68DV7 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
RNF43Q68DV7 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.96□□□□□ -1.3
RNF43Q68DV7 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC6.95□□□□□ -1.3
RNF43Q68DV7 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RNF43Q68DV7 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.95□□□□□ -1.3
RNF43Q68DV7 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RNF43Q68DV7 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
RNF43Q68DV7 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF43Q68DV7 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RNF43Q68DV7 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RNF43Q68DV7 AC025809.2-201ENST00000625085 1802 ntBASIC6.95□□□□□ -1.3
RNF43Q68DV7 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
RNF43Q68DV7 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.95□□□□□ -1.3
RNF43Q68DV7 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
RNF43Q68DV7 FUNDC2P3-201ENST00000334716 533 ntBASIC6.95□□□□□ -1.3
RNF43Q68DV7 Y_RNA.256-201ENST00000364594 104 ntBASIC6.95□□□□□ -1.3
RNF43Q68DV7 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
RNF43Q68DV7 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.95□□□□□ -1.3
RNF43Q68DV7 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
RNF43Q68DV7 VIM2P-201ENST00000402383 1294 ntBASIC6.95□□□□□ -1.3
RNF43Q68DV7 RPL12P23-201ENST00000405880 490 ntBASIC6.95□□□□□ -1.3
RNF43Q68DV7 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
RNF43Q68DV7 GAPDHP57-201ENST00000424400 585 ntBASIC6.95□□□□□ -1.3
RNF43Q68DV7 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.95□□□□□ -1.3
RNF43Q68DV7 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC6.95□□□□□ -1.3
RNF43Q68DV7 AL590103.1-201ENST00000434488 307 ntBASIC6.95□□□□□ -1.3
RNF43Q68DV7 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.95□□□□□ -1.3
RNF43Q68DV7 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
RNF43Q68DV7 AC093155.1-201ENST00000440164 826 ntBASIC6.95□□□□□ -1.3
RNF43Q68DV7 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC6.95□□□□□ -1.3
RNF43Q68DV7 USP9YP8-201ENST00000441913 500 ntBASIC6.95□□□□□ -1.3
RNF43Q68DV7 RPS27P5-201ENST00000444247 244 ntBASIC6.95□□□□□ -1.3
RNF43Q68DV7 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC6.95□□□□□ -1.3
RNF43Q68DV7 AC073072.2-201ENST00000447425 348 ntBASIC6.95□□□□□ -1.3
RNF43Q68DV7 AC097359.1-201ENST00000447946 463 ntBASIC6.95□□□□□ -1.3
RNF43Q68DV7 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.95□□□□□ -1.3
RNF43Q68DV7 SNRPGP9-201ENST00000456025 225 ntBASIC6.95□□□□□ -1.3
RNF43Q68DV7 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC6.95□□□□□ -1.3
RNF43Q68DV7 RN7SL221P-201ENST00000466190 281 ntBASIC6.95□□□□□ -1.3
RNF43Q68DV7 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.95□□□□□ -1.3
RNF43Q68DV7 AC139272.1-201ENST00000505516 640 ntBASIC6.95□□□□□ -1.3
RNF43Q68DV7 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.95□□□□□ -1.3
RNF43Q68DV7 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms