Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 AC020916.2-201ENST00000591242 360 ntBASIC5.71□□□□□ -1.5
RNF220Q5VTB9 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 AL589765.6-201ENST00000601909 549 ntBASIC5.71□□□□□ -1.5
RNF220Q5VTB9 AC009948.4-201ENST00000604692 675 ntBASIC5.71□□□□□ -1.5
RNF220Q5VTB9 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 AL591167.1-201ENST00000607321 456 ntBASIC5.71□□□□□ -1.5
RNF220Q5VTB9 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.71□□□□□ -1.5
RNF220Q5VTB9 AC010975.3-201ENST00000618727 978 ntBASIC5.71□□□□□ -1.5
RNF220Q5VTB9 AC099654.6-201ENST00000636487 512 ntBASIC5.71□□□□□ -1.5
RNF220Q5VTB9 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 MFSD8-220ENST00000641243 1422 ntBASIC5.71□□□□□ -1.5
RNF220Q5VTB9 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 CR788268.1-201ENST00000603931 1809 ntBASIC5.71□□□□□ -1.5
RNF220Q5VTB9 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 AC239868.2-201ENST00000564237 4527 ntBASIC5.71□□□□□ -1.5
RNF220Q5VTB9 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RNF220Q5VTB9 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC024587.1-201ENST00000505925 2157 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC111188.2-201ENST00000529697 1387 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC093849.1-201ENST00000563631 2209 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 RNU4-51P-201ENST00000364206 140 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 SNORD116-12-201ENST00000384468 92 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 RN7SKP97-201ENST00000410966 333 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC048351.1-201ENST00000420064 602 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 OSTCP4-201ENST00000424397 449 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AL136231.1-201ENST00000429407 730 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 RPEP4-201ENST00000437636 602 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 GAPDHP23-201ENST00000444823 993 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 CASP3P1-201ENST00000446037 609 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 PTGES3P5-201ENST00000455109 434 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 MTCO3P35-201ENST00000485582 781 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 SNX18P24-201ENST00000505249 671 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC074087.1-201ENST00000512059 724 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 TMEM97P2-201ENST00000517841 403 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC008507.3-201ENST00000585753 472 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 MIR212-201ENST00000586026 110 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 COX6CP7-201ENST00000597056 208 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC068313.1-201ENST00000604028 1008 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC015712.7-201ENST00000615211 635 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC009159.2-201ENST00000617603 606 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AL137067.2-201ENST00000621202 131 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC109454.4-201ENST00000623411 649 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC015726.3-201ENST00000624501 418 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AP000676.4-201ENST00000624659 623 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 AC097655.1-201ENST00000635075 318 ntBASIC5.7□□□□□ -1.5
RNF220Q5VTB9 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.7□□□□□ -1.5
RNF220Q5VTB9 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms