Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 HMGB1P42-201ENST00000532126 553 ntBASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 AC113368.1-201ENST00000603736 382 ntBASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 MIR6809-201ENST00000612189 116 ntBASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 VN1R74P-201ENST00000613259 503 ntBASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 OR1S1-201ENST00000624470 978 ntBASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 U6.107-201ENST00000637108 79 ntBASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 AC097461.1-201ENST00000568928 2821 ntBASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 AC024651.2-201ENST00000562480 2098 ntBASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 AP001541.1-201ENST00000623322 1904 ntBASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 SAMMSON-210ENST00000641260 1308 ntBASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.97□□□□□ -1.29
CCDC144BQ3MJ40 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
CCDC144BQ3MJ40 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.96□□□□□ -1.29
CCDC144BQ3MJ40 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.96□□□□□ -1.29
CCDC144BQ3MJ40 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 RN7SKP74-201ENST00000362849 309 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 RNA5SP242-201ENST00000364171 118 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 MCTS2P-201ENST00000394552 546 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 RPS7P8-201ENST00000418311 581 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 YWHAEP5-201ENST00000431545 765 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 CETN4P-201ENST00000432407 469 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 PCBP2P1-201ENST00000437262 977 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 VN1R110P-201ENST00000438988 971 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 MTCYBP42-201ENST00000444653 1130 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 HMGN1P36-201ENST00000446623 298 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 PTGES3P5-201ENST00000455109 434 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 AC074386.1-201ENST00000476560 767 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 AC093890.1-201ENST00000502554 540 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 DEFB130C-202ENST00000530001 230 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 AC124293.1-201ENST00000530034 493 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 AC092865.1-201ENST00000544395 1023 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 AC005244.1-201ENST00000582566 339 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 AC027229.1-201ENST00000583887 253 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 AP001357.1-201ENST00000586304 1053 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 EIF1P6-201ENST00000600054 334 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 AC009237.12-201ENST00000604755 742 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 AC006924.1-201ENST00000610750 559 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 AP005431.1-201ENST00000618479 319 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 AC010975.3-201ENST00000618727 978 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 AP000484.1-201ENST00000620067 1252 ntBASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CCDC144BQ3MJ40 HDAC1P2-201ENST00000453661 1398 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 AL606537.1-201ENST00000607258 2011 ntBASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CCDC144BQ3MJ40 IGKV7-3-201ENST00000357453 298 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms