Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 SNORA76.2-201ENST00000517095 137 ntBASIC5.15□□□□□ -1.59
LTBQ06643 AC021678.3-201ENST00000517893 476 ntBASIC5.15□□□□□ -1.59
LTBQ06643 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.15□□□□□ -1.59
LTBQ06643 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.15□□□□□ -1.59
LTBQ06643 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.15□□□□□ -1.59
LTBQ06643 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.15□□□□□ -1.59
LTBQ06643 AC084824.2-201ENST00000548906 345 ntBASIC5.15□□□□□ -1.59
LTBQ06643 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.15□□□□□ -1.59
LTBQ06643 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.15□□□□□ -1.59
LTBQ06643 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.15□□□□□ -1.59
LTBQ06643 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.15□□□□□ -1.59
LTBQ06643 AP001496.3-201ENST00000580230 913 ntBASIC5.15□□□□□ -1.59
LTBQ06643 FAM27E4-201ENST00000605259 342 ntBASIC5.15□□□□□ -1.59
LTBQ06643 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.15□□□□□ -1.59
LTBQ06643 AC022079.1-201ENST00000621546 602 ntBASIC5.15□□□□□ -1.59
LTBQ06643 AP003499.2-201ENST00000624100 483 ntBASIC5.15□□□□□ -1.59
LTBQ06643 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
LTBQ06643 AC005618.4-201ENST00000625053 554 ntBASIC5.15□□□□□ -1.59
LTBQ06643 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LTBQ06643 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LTBQ06643 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
LTBQ06643 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
LTBQ06643 ADAM24P-201ENST00000398655 2101 ntBASIC5.15□□□□□ -1.59
LTBQ06643 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.59
LTBQ06643 AC083837.1-201ENST00000565297 2994 ntBASIC5.15□□□□□ -1.59
LTBQ06643 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.15□□□□□ -1.59
LTBQ06643 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
LTBQ06643 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.15□□□□□ -1.59
LTBQ06643 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
LTBQ06643 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LTBQ06643 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.14□□□□□ -1.59
LTBQ06643 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LTBQ06643 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
LTBQ06643 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.14□□□□□ -1.59
LTBQ06643 AC005261.2-201ENST00000593427 4258 ntBASIC5.14□□□□□ -1.59
LTBQ06643 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.14□□□□□ -1.59
LTBQ06643 AC016745.2-201ENST00000608834 3443 ntBASIC5.14□□□□□ -1.59
LTBQ06643 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
LTBQ06643 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.14□□□□□ -1.59
LTBQ06643 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LTBQ06643 RNU6-792P-201ENST00000363490 107 ntBASIC5.14□□□□□ -1.59
LTBQ06643 RNU6-171P-201ENST00000384354 107 ntBASIC5.14□□□□□ -1.59
LTBQ06643 AC005042.1-201ENST00000393397 800 ntBASIC5.14□□□□□ -1.59
LTBQ06643 FABP12P1-201ENST00000401911 322 ntBASIC5.14□□□□□ -1.59
LTBQ06643 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.14□□□□□ -1.59
LTBQ06643 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.14□□□□□ -1.59
LTBQ06643 MTND2P16-201ENST00000419987 799 ntBASIC5.14□□□□□ -1.59
LTBQ06643 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.14□□□□□ -1.59
LTBQ06643 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.14□□□□□ -1.59
LTBQ06643 MTND2P40-201ENST00000436718 841 ntBASIC5.14□□□□□ -1.59
LTBQ06643 AL772161.1-201ENST00000439130 476 ntBASIC5.14□□□□□ -1.59
LTBQ06643 NANOGP9-201ENST00000439890 892 ntBASIC5.14□□□□□ -1.59
LTBQ06643 AC007000.2-201ENST00000442564 487 ntBASIC5.14□□□□□ -1.59
LTBQ06643 SPRYD7P1-201ENST00000443861 570 ntBASIC5.14□□□□□ -1.59
LTBQ06643 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.14□□□□□ -1.59
LTBQ06643 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.14□□□□□ -1.59
LTBQ06643 AL606490.1-201ENST00000452266 765 ntBASIC5.14□□□□□ -1.59
LTBQ06643 RPS23P2-201ENST00000463671 415 ntBASIC5.14□□□□□ -1.59
LTBQ06643 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.14□□□□□ -1.59
LTBQ06643 RN7SL570P-201ENST00000484405 292 ntBASIC5.14□□□□□ -1.59
LTBQ06643 RPL5P23-201ENST00000496040 868 ntBASIC5.14□□□□□ -1.59
LTBQ06643 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.14□□□□□ -1.59
LTBQ06643 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.14□□□□□ -1.59
LTBQ06643 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
LTBQ06643 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.14□□□□□ -1.59
LTBQ06643 AC074255.1-201ENST00000511259 501 ntBASIC5.14□□□□□ -1.59
LTBQ06643 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.14□□□□□ -1.59
LTBQ06643 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.14□□□□□ -1.59
LTBQ06643 AP003355.1-201ENST00000518956 587 ntBASIC5.14□□□□□ -1.59
LTBQ06643 EEF1A1P37-201ENST00000522748 715 ntBASIC5.14□□□□□ -1.59
LTBQ06643 AC087888.1-201ENST00000550884 1254 ntBASIC5.14□□□□□ -1.59
LTBQ06643 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.14□□□□□ -1.59
LTBQ06643 HSPE1P2-201ENST00000554777 306 ntBASIC5.14□□□□□ -1.59
LTBQ06643 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.14□□□□□ -1.59
LTBQ06643 AGGF1P7-201ENST00000562369 913 ntBASIC5.14□□□□□ -1.59
LTBQ06643 AC106730.2-201ENST00000566641 540 ntBASIC5.14□□□□□ -1.59
LTBQ06643 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.14□□□□□ -1.59
LTBQ06643 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
LTBQ06643 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.14□□□□□ -1.59
LTBQ06643 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.14□□□□□ -1.59
LTBQ06643 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.14□□□□□ -1.59
LTBQ06643 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.14□□□□□ -1.59
LTBQ06643 AF230666.2-201ENST00000602328 725 ntBASIC5.14□□□□□ -1.59
LTBQ06643 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.14□□□□□ -1.59
LTBQ06643 Z99289.3-201ENST00000605586 594 ntBASIC5.14□□□□□ -1.59
LTBQ06643 Mico1.1-201ENST00000611698 204 ntBASIC5.14□□□□□ -1.59
LTBQ06643 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.14□□□□□ -1.59
LTBQ06643 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.14□□□□□ -1.59
LTBQ06643 AL731566.2-201ENST00000618971 317 ntBASIC5.14□□□□□ -1.59
LTBQ06643 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LTBQ06643 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.14□□□□□ -1.59
LTBQ06643 AP003476.1-201ENST00000623984 516 ntBASIC5.14□□□□□ -1.59
LTBQ06643 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.14□□□□□ -1.59
LTBQ06643 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.14□□□□□ -1.59
LTBQ06643 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
LTBQ06643 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LTBQ06643 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.14□□□□□ -1.59
LTBQ06643 AC235565.1-201ENST00000456962 1325 ntBASIC5.14□□□□□ -1.59
LTBQ06643 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.14□□□□□ -1.59
LTBQ06643 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms