Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH11P55287 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH11P55287 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH11P55287 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH11P55287 AL078621.3-201ENST00000623707 2042 ntBASIC4.99□□□□□ -1.61
CDH11P55287 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
CDH11P55287 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CDH11P55287 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH11P55287 RARSP1-201ENST00000542842 1418 ntBASIC4.99□□□□□ -1.61
CDH11P55287 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH11P55287 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH11P55287 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH11P55287 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH11P55287 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH11P55287 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH11P55287 RNA5SP30-201ENST00000365552 115 ntBASIC4.99□□□□□ -1.61
CDH11P55287 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH11P55287 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH11P55287 RPSAP35-201ENST00000413753 818 ntBASIC4.99□□□□□ -1.61
CDH11P55287 TNPO1P1-201ENST00000423641 1138 ntBASIC4.99□□□□□ -1.61
CDH11P55287 MTND4P24-201ENST00000424002 397 ntBASIC4.99□□□□□ -1.61
CDH11P55287 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH11P55287 RNF19BPX-201ENST00000426224 625 ntBASIC4.99□□□□□ -1.61
CDH11P55287 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH11P55287 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH11P55287 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH11P55287 Z84478.1-201ENST00000438230 1219 ntBASIC4.99□□□□□ -1.61
CDH11P55287 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.99□□□□□ -1.61
CDH11P55287 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH11P55287 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH11P55287 CCRL1P1-201ENST00000449542 1053 ntBASIC4.99□□□□□ -1.61
CDH11P55287 OR52E3P-201ENST00000452083 936 ntBASIC4.99□□□□□ -1.61
CDH11P55287 RPS4XP12-201ENST00000461747 709 ntBASIC4.99□□□□□ -1.61
CDH11P55287 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH11P55287 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH11P55287 RN7SL466P-201ENST00000497546 295 ntBASIC4.99□□□□□ -1.61
CDH11P55287 FABP5P6-201ENST00000510588 409 ntBASIC4.99□□□□□ -1.61
CDH11P55287 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH11P55287 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH11P55287 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH11P55287 SNORA43.3-201ENST00000517240 103 ntBASIC4.99□□□□□ -1.61
CDH11P55287 AC067904.2-201ENST00000517322 1283 ntBASIC4.99□□□□□ -1.61
CDH11P55287 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH11P55287 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH11P55287 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CDH11P55287 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.99□□□□□ -1.61
CDH11P55287 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CDH11P55287 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH11P55287 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH11P55287 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH11P55287 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH11P55287 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.99□□□□□ -1.61
CDH11P55287 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH11P55287 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH11P55287 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH11P55287 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH11P55287 AC009237.13-201ENST00000603193 276 ntBASIC4.99□□□□□ -1.61
CDH11P55287 AL450270.1-201ENST00000606160 391 ntBASIC4.99□□□□□ -1.61
CDH11P55287 AC022467.1-201ENST00000614738 749 ntBASIC4.99□□□□□ -1.61
CDH11P55287 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH11P55287 AC106858.1-201ENST00000637497 429 ntBASIC4.99□□□□□ -1.61
CDH11P55287 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CDH11P55287 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CDH11P55287 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CDH11P55287 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH11P55287 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH11P55287 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH11P55287 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.99□□□□□ -1.61
CDH11P55287 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDH11P55287 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CDH11P55287 AC100757.1-201ENST00000616872 1835 ntBASIC4.99□□□□□ -1.61
CDH11P55287 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH11P55287 MT-RNR2-201ENST00000387347 1559 ntBASIC4.99□□□□□ -1.61
CDH11P55287 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH11P55287 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.99□□□□□ -1.61
CDH11P55287 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDH11P55287 CIR1P2-201ENST00000514821 1342 ntBASIC4.98□□□□□ -1.61
CDH11P55287 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CDH11P55287 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
CDH11P55287 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH11P55287 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CDH11P55287 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDH11P55287 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.98□□□□□ -1.61
CDH11P55287 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH11P55287 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDH11P55287 SNORA64.1-201ENST00000362600 132 ntBASIC4.98□□□□□ -1.61
CDH11P55287 AL009179.1-201ENST00000406085 265 ntBASIC4.98□□□□□ -1.61
CDH11P55287 OR3A2-201ENST00000408891 1076 ntBASIC4.98□□□□□ -1.61
CDH11P55287 NENFP1-201ENST00000419476 466 ntBASIC4.98□□□□□ -1.61
CDH11P55287 MARK2P12-201ENST00000420129 585 ntBASIC4.98□□□□□ -1.61
CDH11P55287 MORF4L1P7-201ENST00000426038 703 ntBASIC4.98□□□□□ -1.61
CDH11P55287 AL662874.1-201ENST00000426065 230 ntBASIC4.98□□□□□ -1.61
CDH11P55287 HMGN2P27-201ENST00000427352 270 ntBASIC4.98□□□□□ -1.61
CDH11P55287 RPL7AP49-201ENST00000429522 581 ntBASIC4.98□□□□□ -1.61
CDH11P55287 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.98□□□□□ -1.61
CDH11P55287 AL591438.1-201ENST00000433508 581 ntBASIC4.98□□□□□ -1.61
CDH11P55287 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.98□□□□□ -1.61
CDH11P55287 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.98□□□□□ -1.61
CDH11P55287 AC073909.1-201ENST00000447112 999 ntBASIC4.98□□□□□ -1.61
CDH11P55287 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 355 ms