Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.68□□□□□ -1.5
RAD23BP54727 FRG1EP-201ENST00000634469 770 ntBASIC5.68□□□□□ -1.5
RAD23BP54727 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RAD23BP54727 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RAD23BP54727 MTCO1P11-201ENST00000429111 1528 ntBASIC5.68□□□□□ -1.5
RAD23BP54727 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
RAD23BP54727 AC073136.1-201ENST00000449426 2884 ntBASIC5.68□□□□□ -1.5
RAD23BP54727 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RAD23BP54727 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.68□□□□□ -1.5
RAD23BP54727 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RAD23BP54727 AC024341.1-201ENST00000526444 1552 ntBASIC5.67□□□□□ -1.5
RAD23BP54727 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
RAD23BP54727 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
RAD23BP54727 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
RAD23BP54727 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAD23BP54727 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RAD23BP54727 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
RAD23BP54727 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RAD23BP54727 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RAD23BP54727 RNU1-146P-201ENST00000364015 165 ntBASIC5.67□□□□□ -1.5
RAD23BP54727 RNU6-670P-201ENST00000364312 104 ntBASIC5.67□□□□□ -1.5
RAD23BP54727 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RAD23BP54727 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.67□□□□□ -1.5
RAD23BP54727 AL392003.1-201ENST00000434394 243 ntBASIC5.67□□□□□ -1.5
RAD23BP54727 TCEA1P3-201ENST00000443005 880 ntBASIC5.67□□□□□ -1.5
RAD23BP54727 AC090804.1-201ENST00000448870 490 ntBASIC5.67□□□□□ -1.5
RAD23BP54727 OR2AF1P-201ENST00000454899 889 ntBASIC5.67□□□□□ -1.5
RAD23BP54727 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.67□□□□□ -1.5
RAD23BP54727 RPS26P39-201ENST00000469206 341 ntBASIC5.67□□□□□ -1.5
RAD23BP54727 RPS4XP1-201ENST00000482189 787 ntBASIC5.67□□□□□ -1.5
RAD23BP54727 AC024558.1-201ENST00000505008 528 ntBASIC5.67□□□□□ -1.5
RAD23BP54727 AC021193.1-201ENST00000511607 420 ntBASIC5.67□□□□□ -1.5
RAD23BP54727 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.67□□□□□ -1.5
RAD23BP54727 CDC42P3-201ENST00000518493 633 ntBASIC5.67□□□□□ -1.5
RAD23BP54727 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.67□□□□□ -1.5
RAD23BP54727 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.67□□□□□ -1.5
RAD23BP54727 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.67□□□□□ -1.5
RAD23BP54727 AC006518.1-201ENST00000541449 943 ntBASIC5.67□□□□□ -1.5
RAD23BP54727 NMNAT1P5-201ENST00000559657 841 ntBASIC5.67□□□□□ -1.5
RAD23BP54727 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.67□□□□□ -1.5
RAD23BP54727 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.67□□□□□ -1.5
RAD23BP54727 AC109309.2-201ENST00000612597 332 ntBASIC5.67□□□□□ -1.5
RAD23BP54727 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.67□□□□□ -1.5
RAD23BP54727 MIR6837-201ENST00000620884 64 ntBASIC5.67□□□□□ -1.5
RAD23BP54727 AL391262.2-201ENST00000622466 494 ntBASIC5.67□□□□□ -1.5
RAD23BP54727 AC119674.1-220ENST00000641502 1048 ntBASIC5.67□□□□□ -1.5
RAD23BP54727 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.67□□□□□ -1.5
RAD23BP54727 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.67□□□□□ -1.5
RAD23BP54727 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RAD23BP54727 AC079298.1-201ENST00000625026 1619 ntBASIC5.66□□□□□ -1.5
RAD23BP54727 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RAD23BP54727 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAD23BP54727 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAD23BP54727 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAD23BP54727 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAD23BP54727 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RAD23BP54727 RNU1-149P-201ENST00000390870 161 ntBASIC5.66□□□□□ -1.5
RAD23BP54727 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.66□□□□□ -1.5
RAD23BP54727 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.66□□□□□ -1.5
RAD23BP54727 AC124944.2-201ENST00000429866 1242 ntBASIC5.66□□□□□ -1.5
RAD23BP54727 FAM96AP1-201ENST00000430879 482 ntBASIC5.66□□□□□ -1.5
RAD23BP54727 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.66□□□□□ -1.5
RAD23BP54727 CBX1P5-201ENST00000475330 559 ntBASIC5.66□□□□□ -1.5
RAD23BP54727 AP000797.2-201ENST00000475768 606 ntBASIC5.66□□□□□ -1.5
RAD23BP54727 COX6B1P2-201ENST00000489624 230 ntBASIC5.66□□□□□ -1.5
RAD23BP54727 RPL15P21-201ENST00000495592 567 ntBASIC5.66□□□□□ -1.5
RAD23BP54727 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.66□□□□□ -1.5
RAD23BP54727 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.66□□□□□ -1.5
RAD23BP54727 AC007225.2-201ENST00000562529 256 ntBASIC5.66□□□□□ -1.5
RAD23BP54727 RN7SL753P-201ENST00000581238 290 ntBASIC5.66□□□□□ -1.5
RAD23BP54727 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.66□□□□□ -1.5
RAD23BP54727 OR4H6P-202ENST00000603819 340 ntBASIC5.66□□□□□ -1.5
RAD23BP54727 AC005252.1-201ENST00000604518 1063 ntBASIC5.66□□□□□ -1.5
RAD23BP54727 AL512506.1-201ENST00000613918 449 ntBASIC5.66□□□□□ -1.5
RAD23BP54727 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.66□□□□□ -1.5
RAD23BP54727 AP002371.2-201ENST00000624450 503 ntBASIC5.66□□□□□ -1.5
RAD23BP54727 CYP4F35P-202ENST00000636121 390 ntBASIC5.66□□□□□ -1.5
RAD23BP54727 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
RAD23BP54727 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RAD23BP54727 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RAD23BP54727 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.66□□□□□ -1.5
RAD23BP54727 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAD23BP54727 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.66□□□□□ -1.5
RAD23BP54727 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
RAD23BP54727 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RAD23BP54727 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RAD23BP54727 CDY11P-201ENST00000447168 1651 ntBASIC5.66□□□□□ -1.5
RAD23BP54727 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RAD23BP54727 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RAD23BP54727 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RAD23BP54727 AC068446.1-201ENST00000556425 1549 ntBASIC5.65□□□□□ -1.5
RAD23BP54727 AL034549.2-201ENST00000618285 3373 ntBASIC5.65□□□□□ -1.5
RAD23BP54727 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RAD23BP54727 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.65□□□□□ -1.5
RAD23BP54727 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RAD23BP54727 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
RAD23BP54727 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RAD23BP54727 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
RAD23BP54727 U3.2-201ENST00000362981 210 ntBASIC5.65□□□□□ -1.5
RAD23BP54727 SNORA27.3-201ENST00000364937 134 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms