Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 NPM1P40-201ENST00000412758 733 ntBASIC5.32□□□□□ -1.56
SLC1A1P43005 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.32□□□□□ -1.56
SLC1A1P43005 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.32□□□□□ -1.56
SLC1A1P43005 AL138899.2-201ENST00000439139 499 ntBASIC5.32□□□□□ -1.56
SLC1A1P43005 TXNP5-201ENST00000441043 315 ntBASIC5.32□□□□□ -1.56
SLC1A1P43005 AL356981.1-201ENST00000454879 684 ntBASIC5.32□□□□□ -1.56
SLC1A1P43005 AC093166.2-201ENST00000455969 1017 ntBASIC5.32□□□□□ -1.56
SLC1A1P43005 AC108693.1-201ENST00000496068 432 ntBASIC5.32□□□□□ -1.56
SLC1A1P43005 RN7SL591P-201ENST00000496150 292 ntBASIC5.32□□□□□ -1.56
SLC1A1P43005 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.32□□□□□ -1.56
SLC1A1P43005 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.32□□□□□ -1.56
SLC1A1P43005 AC127381.1-201ENST00000555979 939 ntBASIC5.32□□□□□ -1.56
SLC1A1P43005 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.32□□□□□ -1.56
SLC1A1P43005 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.32□□□□□ -1.56
SLC1A1P43005 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.32□□□□□ -1.56
SLC1A1P43005 SNORD95-201ENST00000579879 68 ntBASIC5.32□□□□□ -1.56
SLC1A1P43005 AC095055.1-201ENST00000603472 1113 ntBASIC5.32□□□□□ -1.56
SLC1A1P43005 AC109309.2-201ENST00000612597 332 ntBASIC5.32□□□□□ -1.56
SLC1A1P43005 AC004477.3-201ENST00000614061 590 ntBASIC5.32□□□□□ -1.56
SLC1A1P43005 AC037198.3-201ENST00000616754 526 ntBASIC5.32□□□□□ -1.56
SLC1A1P43005 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.32□□□□□ -1.56
SLC1A1P43005 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.32□□□□□ -1.56
SLC1A1P43005 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.32□□□□□ -1.56
SLC1A1P43005 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
SLC1A1P43005 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
SLC1A1P43005 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.32□□□□□ -1.56
SLC1A1P43005 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.32□□□□□ -1.56
SLC1A1P43005 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
SLC1A1P43005 AC083843.2-201ENST00000568248 6253 ntBASIC5.31□□□□□ -1.56
SLC1A1P43005 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC1A1P43005 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC1A1P43005 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC1A1P43005 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SLC1A1P43005 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.31□□□□□ -1.56
SLC1A1P43005 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC1A1P43005 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
SLC1A1P43005 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC1A1P43005 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.31□□□□□ -1.56
SLC1A1P43005 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC1A1P43005 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC1A1P43005 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.31□□□□□ -1.56
SLC1A1P43005 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.31□□□□□ -1.56
SLC1A1P43005 OR52E7P-201ENST00000452394 933 ntBASIC5.31□□□□□ -1.56
SLC1A1P43005 SEPT7P3-201ENST00000455017 621 ntBASIC5.31□□□□□ -1.56
SLC1A1P43005 RPL7P39-201ENST00000481157 744 ntBASIC5.31□□□□□ -1.56
SLC1A1P43005 AL136038.1-201ENST00000497246 351 ntBASIC5.31□□□□□ -1.56
SLC1A1P43005 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC1A1P43005 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC1A1P43005 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC1A1P43005 BX510359.5-201ENST00000515651 304 ntBASIC5.31□□□□□ -1.56
SLC1A1P43005 OR10D4P-201ENST00000525892 951 ntBASIC5.31□□□□□ -1.56
SLC1A1P43005 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.31□□□□□ -1.56
SLC1A1P43005 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC1A1P43005 AC079395.2-201ENST00000610982 737 ntBASIC5.31□□□□□ -1.56
SLC1A1P43005 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.31□□□□□ -1.56
SLC1A1P43005 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.31□□□□□ -1.56
SLC1A1P43005 AP001962.1-201ENST00000624114 559 ntBASIC5.31□□□□□ -1.56
SLC1A1P43005 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.31□□□□□ -1.56
SLC1A1P43005 CASC19-264ENST00000641912 1184 ntBASIC5.31□□□□□ -1.56
SLC1A1P43005 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.31□□□□□ -1.56
SLC1A1P43005 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC1A1P43005 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
SLC1A1P43005 AC021242.1-201ENST00000507315 2035 ntBASIC5.31□□□□□ -1.56
SLC1A1P43005 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SLC1A1P43005 AL022393.1-201ENST00000625142 1677 ntBASIC5.31□□□□□ -1.56
SLC1A1P43005 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SLC1A1P43005 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SLC1A1P43005 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SLC1A1P43005 AL672167.1-204ENST00000641875 3017 ntBASIC5.3□□□□□ -1.56
SLC1A1P43005 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SLC1A1P43005 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC1A1P43005 SNORA17.1-201ENST00000362945 126 ntBASIC5.3□□□□□ -1.56
SLC1A1P43005 AL353625.1-202ENST00000366273 571 ntBASIC5.3□□□□□ -1.56
SLC1A1P43005 RAB5CP1-201ENST00000395972 580 ntBASIC5.3□□□□□ -1.56
SLC1A1P43005 RN7SKP97-201ENST00000410966 333 ntBASIC5.3□□□□□ -1.56
SLC1A1P43005 NPM1P22-201ENST00000427761 952 ntBASIC5.3□□□□□ -1.56
SLC1A1P43005 RPS29P9-201ENST00000440360 171 ntBASIC5.3□□□□□ -1.56
SLC1A1P43005 AL450023.3-201ENST00000440592 271 ntBASIC5.3□□□□□ -1.56
SLC1A1P43005 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC1A1P43005 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC1A1P43005 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC1A1P43005 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC1A1P43005 SUMO2P4-201ENST00000504193 276 ntBASIC5.3□□□□□ -1.56
SLC1A1P43005 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC1A1P43005 HMGB3P16-201ENST00000508037 287 ntBASIC5.3□□□□□ -1.56
SLC1A1P43005 ENPP7P9-201ENST00000514456 627 ntBASIC5.3□□□□□ -1.56
SLC1A1P43005 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC1A1P43005 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC1A1P43005 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.3□□□□□ -1.56
SLC1A1P43005 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC1A1P43005 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC1A1P43005 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC1A1P43005 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC1A1P43005 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.3□□□□□ -1.56
SLC1A1P43005 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC1A1P43005 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC1A1P43005 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC1A1P43005 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SLC1A1P43005 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC1A1P43005 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 136.7 ms