Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CASQ1P31415 RNA5SP477-201ENST00000362639 119 ntBASIC5.53□□□□□ -1.52
CASQ1P31415 RNA5SP231-201ENST00000410496 138 ntBASIC5.53□□□□□ -1.52
CASQ1P31415 E2F6P2-201ENST00000420708 748 ntBASIC5.53□□□□□ -1.52
CASQ1P31415 AL133173.1-201ENST00000423458 397 ntBASIC5.53□□□□□ -1.52
CASQ1P31415 SRSF1P1-201ENST00000424058 520 ntBASIC5.53□□□□□ -1.52
CASQ1P31415 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.53□□□□□ -1.52
CASQ1P31415 UBE2V2P4-201ENST00000447495 259 ntBASIC5.53□□□□□ -1.52
CASQ1P31415 AC068228.1-201ENST00000461723 211 ntBASIC5.53□□□□□ -1.52
CASQ1P31415 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.53□□□□□ -1.52
CASQ1P31415 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.53□□□□□ -1.52
CASQ1P31415 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.53□□□□□ -1.52
CASQ1P31415 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.53□□□□□ -1.52
CASQ1P31415 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.53□□□□□ -1.52
CASQ1P31415 RPL23AP53-201ENST00000521854 457 ntBASIC5.53□□□□□ -1.52
CASQ1P31415 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.53□□□□□ -1.52
CASQ1P31415 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CASQ1P31415 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.53□□□□□ -1.52
CASQ1P31415 AC079905.1-201ENST00000549280 475 ntBASIC5.53□□□□□ -1.52
CASQ1P31415 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.53□□□□□ -1.52
CASQ1P31415 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.53□□□□□ -1.52
CASQ1P31415 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.53□□□□□ -1.52
CASQ1P31415 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.53□□□□□ -1.52
CASQ1P31415 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.53□□□□□ -1.52
CASQ1P31415 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CASQ1P31415 BNIP3P35-201ENST00000604530 490 ntBASIC5.53□□□□□ -1.52
CASQ1P31415 AC118658.2-201ENST00000618697 459 ntBASIC5.53□□□□□ -1.52
CASQ1P31415 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.53□□□□□ -1.52
CASQ1P31415 BMS1P21-201ENST00000634565 365 ntBASIC5.53□□□□□ -1.52
CASQ1P31415 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.53□□□□□ -1.52
CASQ1P31415 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CASQ1P31415 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
CASQ1P31415 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.53□□□□□ -1.52
CASQ1P31415 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CASQ1P31415 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.53□□□□□ -1.52
CASQ1P31415 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.53□□□□□ -1.52
CASQ1P31415 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.53□□□□□ -1.52
CASQ1P31415 DDX18P4-201ENST00000511690 1966 ntBASIC5.53□□□□□ -1.52
CASQ1P31415 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.53□□□□□ -1.52
CASQ1P31415 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
CASQ1P31415 AC107068.1-201ENST00000563286 4218 ntBASIC5.53□□□□□ -1.52
CASQ1P31415 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.53□□□□□ -1.52
CASQ1P31415 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.53□□□□□ -1.52
CASQ1P31415 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CASQ1P31415 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CASQ1P31415 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CASQ1P31415 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.52□□□□□ -1.53
CASQ1P31415 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.52□□□□□ -1.53
CASQ1P31415 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CASQ1P31415 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.52□□□□□ -1.53
CASQ1P31415 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CASQ1P31415 AC091046.3-201ENST00000631455 1574 ntBASIC5.52□□□□□ -1.53
CASQ1P31415 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CASQ1P31415 RNU1-94P-201ENST00000362627 173 ntBASIC5.52□□□□□ -1.53
CASQ1P31415 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.52□□□□□ -1.53
CASQ1P31415 OR13C3-201ENST00000374781 1108 ntBASIC5.52□□□□□ -1.53
CASQ1P31415 HMGB1P20-201ENST00000402555 677 ntBASIC5.52□□□□□ -1.53
CASQ1P31415 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.52□□□□□ -1.53
CASQ1P31415 EIF4A1P1-201ENST00000420241 934 ntBASIC5.52□□□□□ -1.53
CASQ1P31415 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CASQ1P31415 CYCSP34-201ENST00000458172 304 ntBASIC5.52□□□□□ -1.53
CASQ1P31415 AC018639.1-201ENST00000492994 442 ntBASIC5.52□□□□□ -1.53
CASQ1P31415 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.52□□□□□ -1.53
CASQ1P31415 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.52□□□□□ -1.53
CASQ1P31415 PGBD4P4-201ENST00000509673 613 ntBASIC5.52□□□□□ -1.53
CASQ1P31415 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.52□□□□□ -1.53
CASQ1P31415 TCP11X3P-202ENST00000514289 1254 ntBASIC5.52□□□□□ -1.53
CASQ1P31415 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.52□□□□□ -1.53
CASQ1P31415 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.52□□□□□ -1.53
CASQ1P31415 YWHABP2-201ENST00000540201 713 ntBASIC5.52□□□□□ -1.53
CASQ1P31415 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.52□□□□□ -1.53
CASQ1P31415 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.52□□□□□ -1.53
CASQ1P31415 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.52□□□□□ -1.53
CASQ1P31415 MRPL45P2-203ENST00000573318 473 ntBASIC5.52□□□□□ -1.53
CASQ1P31415 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CASQ1P31415 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.52□□□□□ -1.53
CASQ1P31415 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CASQ1P31415 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.52□□□□□ -1.53
CASQ1P31415 AC008814.1-201ENST00000603797 406 ntBASIC5.52□□□□□ -1.53
CASQ1P31415 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.52□□□□□ -1.53
CASQ1P31415 LINC00901.1-201ENST00000617252 152 ntBASIC5.52□□□□□ -1.53
CASQ1P31415 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.52□□□□□ -1.53
CASQ1P31415 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.52□□□□□ -1.53
CASQ1P31415 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CASQ1P31415 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CASQ1P31415 DLD-205ENST00000440410 1993 ntTSL 2 BASIC5.52□□□□□ -1.53
CASQ1P31415 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CASQ1P31415 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CASQ1P31415 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CASQ1P31415 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CASQ1P31415 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CASQ1P31415 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
CASQ1P31415 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CASQ1P31415 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CASQ1P31415 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.51□□□□□ -1.53
CASQ1P31415 OR14L1P-202ENST00000641545 3009 ntBASIC5.51□□□□□ -1.53
CASQ1P31415 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
CASQ1P31415 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CASQ1P31415 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CASQ1P31415 RNA5SP394-201ENST00000364216 119 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms