Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 FABP7P2-201ENST00000429946 379 ntBASIC5.71□□□□□ -1.5
HOXC13P31276 AC099670.2-201ENST00000435130 321 ntBASIC5.71□□□□□ -1.5
HOXC13P31276 MAPRE1P3-201ENST00000435438 796 ntBASIC5.71□□□□□ -1.5
HOXC13P31276 AC092106.1-201ENST00000444291 373 ntBASIC5.71□□□□□ -1.5
HOXC13P31276 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXC13P31276 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.71□□□□□ -1.5
HOXC13P31276 AC096741.1-201ENST00000472250 846 ntBASIC5.71□□□□□ -1.5
HOXC13P31276 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.71□□□□□ -1.5
HOXC13P31276 AC147055.3-201ENST00000510547 851 ntBASIC5.71□□□□□ -1.5
HOXC13P31276 RNA5SP228-201ENST00000516232 133 ntBASIC5.71□□□□□ -1.5
HOXC13P31276 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC13P31276 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC13P31276 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXC13P31276 AC009268.1-201ENST00000561352 1203 ntBASIC5.71□□□□□ -1.5
HOXC13P31276 AC106730.2-201ENST00000566641 540 ntBASIC5.71□□□□□ -1.5
HOXC13P31276 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXC13P31276 AC087763.1-201ENST00000603391 286 ntBASIC5.71□□□□□ -1.5
HOXC13P31276 AC034236.3-201ENST00000605999 461 ntBASIC5.71□□□□□ -1.5
HOXC13P31276 AC100827.5-201ENST00000615883 426 ntBASIC5.71□□□□□ -1.5
HOXC13P31276 AL118522.2-201ENST00000616045 615 ntBASIC5.71□□□□□ -1.5
HOXC13P31276 AC068870.2-201ENST00000620635 389 ntBASIC5.71□□□□□ -1.5
HOXC13P31276 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.71□□□□□ -1.5
HOXC13P31276 CFTRP2-201ENST00000634304 199 ntBASIC5.71□□□□□ -1.5
HOXC13P31276 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC13P31276 AC087516.1-201ENST00000561236 2428 ntBASIC5.71□□□□□ -1.5
HOXC13P31276 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.71□□□□□ -1.5
HOXC13P31276 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC13P31276 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXC13P31276 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXC13P31276 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC13P31276 BX005019.1-201ENST00000561881 1810 ntBASIC5.71□□□□□ -1.5
HOXC13P31276 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HOXC13P31276 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC13P31276 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC13P31276 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
HOXC13P31276 AL603750.1-201ENST00000624216 1717 ntBASIC5.71□□□□□ -1.5
HOXC13P31276 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.71□□□□□ -1.5
HOXC13P31276 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC13P31276 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXC13P31276 AC010329.2-201ENST00000595195 2737 ntBASIC5.7□□□□□ -1.5
HOXC13P31276 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
HOXC13P31276 SPATA2P1-201ENST00000431223 2055 ntBASIC5.7□□□□□ -1.5
HOXC13P31276 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC13P31276 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC13P31276 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXC13P31276 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXC13P31276 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC13P31276 AL450326.2-201ENST00000421913 1962 ntBASIC5.7□□□□□ -1.5
HOXC13P31276 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC13P31276 MIR551A-201ENST00000385042 96 ntBASIC5.7□□□□□ -1.5
HOXC13P31276 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC13P31276 AL109941.1-201ENST00000401925 229 ntBASIC5.7□□□□□ -1.5
HOXC13P31276 RPL37P18-201ENST00000411602 243 ntBASIC5.7□□□□□ -1.5
HOXC13P31276 RPSAP35-201ENST00000413753 818 ntBASIC5.7□□□□□ -1.5
HOXC13P31276 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXC13P31276 AC244453.4-201ENST00000419150 388 ntBASIC5.7□□□□□ -1.5
HOXC13P31276 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXC13P31276 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXC13P31276 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXC13P31276 CBX1P2-201ENST00000453841 458 ntBASIC5.7□□□□□ -1.5
HOXC13P31276 RN7SL51P-201ENST00000468230 285 ntBASIC5.7□□□□□ -1.5
HOXC13P31276 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXC13P31276 OR4A17P-201ENST00000526032 904 ntBASIC5.7□□□□□ -1.5
HOXC13P31276 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXC13P31276 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXC13P31276 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXC13P31276 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.7□□□□□ -1.5
HOXC13P31276 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXC13P31276 OR51C1P-201ENST00000608504 942 ntBASIC5.7□□□□□ -1.5
HOXC13P31276 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXC13P31276 AC092159.4-201ENST00000624944 550 ntBASIC5.7□□□□□ -1.5
HOXC13P31276 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXC13P31276 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXC13P31276 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXC13P31276 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC13P31276 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXC13P31276 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC13P31276 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC13P31276 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXC13P31276 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
HOXC13P31276 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXC13P31276 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXC13P31276 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.7□□□□□ -1.5
HOXC13P31276 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.7□□□□□ -1.5
HOXC13P31276 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
HOXC13P31276 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC13P31276 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC13P31276 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC13P31276 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXC13P31276 AC109446.4-201ENST00000623235 2755 ntBASIC5.69□□□□□ -1.5
HOXC13P31276 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
HOXC13P31276 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HOXC13P31276 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC13P31276 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC13P31276 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.69□□□□□ -1.5
HOXC13P31276 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
HOXC13P31276 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
HOXC13P31276 RNA5SP335-201ENST00000363817 110 ntBASIC5.69□□□□□ -1.5
HOXC13P31276 RN7SKP6-201ENST00000364795 319 ntBASIC5.69□□□□□ -1.5
HOXC13P31276 RNU6-564P-201ENST00000410983 104 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms