Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC4.72□□□□□ -1.65
SPTA1P02549 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
SPTA1P02549 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SPTA1P02549 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.72□□□□□ -1.65
SPTA1P02549 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.72□□□□□ -1.65
SPTA1P02549 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SPTA1P02549 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.72□□□□□ -1.65
SPTA1P02549 AC009962.1-201ENST00000567327 3813 ntBASIC4.72□□□□□ -1.65
SPTA1P02549 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SPTA1P02549 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
SPTA1P02549 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC4.72□□□□□ -1.65
SPTA1P02549 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.72□□□□□ -1.65
SPTA1P02549 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SPTA1P02549 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC4.72□□□□□ -1.65
SPTA1P02549 RNU6-525P-201ENST00000363685 104 ntBASIC4.72□□□□□ -1.65
SPTA1P02549 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
SPTA1P02549 RNGTTP1-201ENST00000420965 728 ntBASIC4.72□□□□□ -1.65
SPTA1P02549 RHOT1P3-201ENST00000436571 331 ntBASIC4.72□□□□□ -1.65
SPTA1P02549 AC112498.1-201ENST00000444401 332 ntBASIC4.72□□□□□ -1.65
SPTA1P02549 AC020593.1-201ENST00000507399 299 ntBASIC4.72□□□□□ -1.65
SPTA1P02549 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.72□□□□□ -1.65
SPTA1P02549 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.72□□□□□ -1.65
SPTA1P02549 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.72□□□□□ -1.65
SPTA1P02549 AC017100.2-201ENST00000584628 355 ntBASIC4.72□□□□□ -1.65
SPTA1P02549 AC011497.2-201ENST00000600255 639 ntBASIC4.72□□□□□ -1.65
SPTA1P02549 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.72□□□□□ -1.65
SPTA1P02549 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.72□□□□□ -1.65
SPTA1P02549 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC4.72□□□□□ -1.65
SPTA1P02549 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.65
SPTA1P02549 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC4.71□□□□□ -1.65
SPTA1P02549 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.71□□□□□ -1.65
SPTA1P02549 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
SPTA1P02549 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC4.71□□□□□ -1.66
SPTA1P02549 AC092747.4-201ENST00000620519 1861 ntBASIC4.71□□□□□ -1.66
SPTA1P02549 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
SPTA1P02549 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC4.71□□□□□ -1.66
SPTA1P02549 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SPTA1P02549 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SPTA1P02549 OR4K15-201ENST00000305051 1216 ntBASIC4.71□□□□□ -1.66
SPTA1P02549 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SPTA1P02549 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SPTA1P02549 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.71□□□□□ -1.66
SPTA1P02549 AC069213.2-201ENST00000420238 366 ntBASIC4.71□□□□□ -1.66
SPTA1P02549 RPL17P2-201ENST00000491913 451 ntBASIC4.71□□□□□ -1.66
SPTA1P02549 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.71□□□□□ -1.66
SPTA1P02549 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.71□□□□□ -1.66
SPTA1P02549 MIR4715-201ENST00000584117 79 ntBASIC4.71□□□□□ -1.66
SPTA1P02549 AC105254.2-201ENST00000603636 436 ntBASIC4.71□□□□□ -1.66
SPTA1P02549 AC004232.3-201ENST00000622977 525 ntBASIC4.71□□□□□ -1.66
SPTA1P02549 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SPTA1P02549 MAPK10-263ENST00000641052 4307 ntBASIC4.71□□□□□ -1.66
SPTA1P02549 SDAD1P1-202ENST00000524156 2051 ntBASIC4.71□□□□□ -1.66
SPTA1P02549 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC4.71□□□□□ -1.66
SPTA1P02549 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.71□□□□□ -1.66
SPTA1P02549 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC4.71□□□□□ -1.66
SPTA1P02549 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SPTA1P02549 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
SPTA1P02549 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SPTA1P02549 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
SPTA1P02549 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SPTA1P02549 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
SPTA1P02549 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SPTA1P02549 SNORD8-201ENST00000363915 110 ntBASIC4.71□□□□□ -1.66
SPTA1P02549 MIR670-201ENST00000390142 98 ntBASIC4.71□□□□□ -1.66
SPTA1P02549 AL121977.1-201ENST00000401636 979 ntBASIC4.71□□□□□ -1.66
SPTA1P02549 AP002530.1-201ENST00000405705 684 ntBASIC4.71□□□□□ -1.66
SPTA1P02549 BX510359.2-201ENST00000417920 305 ntBASIC4.71□□□□□ -1.66
SPTA1P02549 AL161722.2-201ENST00000434731 981 ntBASIC4.71□□□□□ -1.66
SPTA1P02549 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.71□□□□□ -1.66
SPTA1P02549 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.71□□□□□ -1.66
SPTA1P02549 AP000797.2-201ENST00000475768 606 ntBASIC4.71□□□□□ -1.66
SPTA1P02549 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC4.71□□□□□ -1.66
SPTA1P02549 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.71□□□□□ -1.66
SPTA1P02549 AC244502.2-201ENST00000543361 851 ntBASIC4.71□□□□□ -1.66
SPTA1P02549 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.71□□□□□ -1.66
SPTA1P02549 CASC22-202ENST00000628396 802 ntTSL 5 BASIC4.71□□□□□ -1.66
SPTA1P02549 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.71□□□□□ -1.66
SPTA1P02549 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.7□□□□□ -1.66
SPTA1P02549 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SPTA1P02549 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SPTA1P02549 AL132640.2-201ENST00000559968 1698 ntBASIC4.7□□□□□ -1.66
SPTA1P02549 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SPTA1P02549 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC4.7□□□□□ -1.66
SPTA1P02549 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.7□□□□□ -1.66
SPTA1P02549 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SPTA1P02549 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.7□□□□□ -1.66
SPTA1P02549 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
SPTA1P02549 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SPTA1P02549 U3.30-201ENST00000391308 210 ntBASIC4.7□□□□□ -1.66
SPTA1P02549 ATP5F1P3-201ENST00000397213 657 ntBASIC4.7□□□□□ -1.66
SPTA1P02549 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.7□□□□□ -1.66
SPTA1P02549 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.7□□□□□ -1.66
SPTA1P02549 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.7□□□□□ -1.66
SPTA1P02549 SNORD125-201ENST00000459538 96 ntBASIC4.7□□□□□ -1.66
SPTA1P02549 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.7□□□□□ -1.66
SPTA1P02549 OR7E128P-201ENST00000532736 1024 ntBASIC4.7□□□□□ -1.66
SPTA1P02549 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.7□□□□□ -1.66
SPTA1P02549 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.7□□□□□ -1.66
SPTA1P02549 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.7□□□□□ -1.66
SPTA1P02549 AC009237.13-201ENST00000603193 276 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms