Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.41□□□□□ -1.54
PDGFBP01127 YWHABP2-201ENST00000540201 713 ntBASIC5.41□□□□□ -1.54
PDGFBP01127 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.41□□□□□ -1.54
PDGFBP01127 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.41□□□□□ -1.54
PDGFBP01127 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.41□□□□□ -1.54
PDGFBP01127 TVP23CP2-201ENST00000571473 623 ntBASIC5.41□□□□□ -1.54
PDGFBP01127 AP000919.1-201ENST00000582850 985 ntBASIC5.41□□□□□ -1.54
PDGFBP01127 AL590392.1-201ENST00000604960 446 ntBASIC5.41□□□□□ -1.54
PDGFBP01127 AL109618.2-201ENST00000605527 211 ntBASIC5.41□□□□□ -1.54
PDGFBP01127 AL445423.1-201ENST00000609941 536 ntBASIC5.41□□□□□ -1.54
PDGFBP01127 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.41□□□□□ -1.54
PDGFBP01127 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
PDGFBP01127 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDGFBP01127 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
PDGFBP01127 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDGFBP01127 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PDGFBP01127 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
PDGFBP01127 AC125336.1-201ENST00000508893 2827 ntBASIC5.41□□□□□ -1.54
PDGFBP01127 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PDGFBP01127 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.41□□□□□ -1.54
PDGFBP01127 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.41□□□□□ -1.54
PDGFBP01127 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.41□□□□□ -1.54
PDGFBP01127 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.41□□□□□ -1.54
PDGFBP01127 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.41□□□□□ -1.54
PDGFBP01127 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
PDGFBP01127 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.41□□□□□ -1.54
PDGFBP01127 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.41□□□□□ -1.54
PDGFBP01127 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.4□□□□□ -1.54
PDGFBP01127 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFBP01127 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFBP01127 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.4□□□□□ -1.54
PDGFBP01127 AC232271.1-201ENST00000602455 2715 ntBASIC5.4□□□□□ -1.54
PDGFBP01127 AL121839.2-201ENST00000565058 6943 ntBASIC5.4□□□□□ -1.54
PDGFBP01127 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFBP01127 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
PDGFBP01127 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFBP01127 AL606537.1-201ENST00000607258 2011 ntBASIC5.4□□□□□ -1.54
PDGFBP01127 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFBP01127 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.4□□□□□ -1.54
PDGFBP01127 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFBP01127 AP003170.5-201ENST00000397185 335 ntBASIC5.4□□□□□ -1.54
PDGFBP01127 MIR1193-201ENST00000408109 78 ntBASIC5.4□□□□□ -1.54
PDGFBP01127 AC096921.1-201ENST00000411661 375 ntBASIC5.4□□□□□ -1.54
PDGFBP01127 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.4□□□□□ -1.54
PDGFBP01127 TMEM183AP1-205ENST00000432739 290 ntBASIC5.4□□□□□ -1.54
PDGFBP01127 RPL5P25-201ENST00000441148 775 ntBASIC5.4□□□□□ -1.54
PDGFBP01127 RPL36AP15-201ENST00000444514 266 ntBASIC5.4□□□□□ -1.54
PDGFBP01127 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.4□□□□□ -1.54
PDGFBP01127 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.4□□□□□ -1.54
PDGFBP01127 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PDGFBP01127 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.4□□□□□ -1.54
PDGFBP01127 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.4□□□□□ -1.54
PDGFBP01127 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.4□□□□□ -1.54
PDGFBP01127 AC078899.1-201ENST00000521432 1185 ntBASIC5.4□□□□□ -1.54
PDGFBP01127 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.4□□□□□ -1.54
PDGFBP01127 AL121594.2-201ENST00000541658 472 ntBASIC5.4□□□□□ -1.54
PDGFBP01127 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.4□□□□□ -1.54
PDGFBP01127 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.4□□□□□ -1.54
PDGFBP01127 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFBP01127 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.4□□□□□ -1.54
PDGFBP01127 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFBP01127 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFBP01127 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFBP01127 AL049874.4-201ENST00000557593 255 ntBASIC5.4□□□□□ -1.54
PDGFBP01127 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFBP01127 AC122134.1-201ENST00000565664 1104 ntBASIC5.4□□□□□ -1.54
PDGFBP01127 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.4□□□□□ -1.54
PDGFBP01127 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.4□□□□□ -1.54
PDGFBP01127 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.4□□□□□ -1.54
PDGFBP01127 AL162431.4-201ENST00000604674 411 ntBASIC5.4□□□□□ -1.54
PDGFBP01127 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.54
PDGFBP01127 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PDGFBP01127 AC006840.1-201ENST00000623069 542 ntBASIC5.4□□□□□ -1.54
PDGFBP01127 AC004656.1-201ENST00000568479 4951 ntBASIC5.4□□□□□ -1.55
PDGFBP01127 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
PDGFBP01127 AL731532.1-201ENST00000623972 4236 ntBASIC5.4□□□□□ -1.55
PDGFBP01127 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PDGFBP01127 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
PDGFBP01127 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PDGFBP01127 OR10AB1P-202ENST00000641219 1686 ntBASIC5.4□□□□□ -1.55
PDGFBP01127 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PDGFBP01127 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
PDGFBP01127 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFBP01127 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.39□□□□□ -1.55
PDGFBP01127 AC068769.1-201ENST00000474767 2426 ntBASIC5.39□□□□□ -1.55
PDGFBP01127 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFBP01127 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFBP01127 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFBP01127 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFBP01127 AC011933.2-201ENST00000578539 2790 ntBASIC5.39□□□□□ -1.55
PDGFBP01127 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFBP01127 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFBP01127 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.39□□□□□ -1.55
PDGFBP01127 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PDGFBP01127 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFBP01127 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDGFBP01127 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.39□□□□□ -1.55
PDGFBP01127 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.39□□□□□ -1.55
PDGFBP01127 MIR365B-201ENST00000362317 111 ntBASIC5.39□□□□□ -1.55
PDGFBP01127 SNORD8-201ENST00000363915 110 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms