Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC7.01□□□□□ -1.29
SOX1O00570 AC009063.1-201ENST00000563342 702 ntBASIC7.01□□□□□ -1.29
SOX1O00570 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC7.01□□□□□ -1.29
SOX1O00570 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.01□□□□□ -1.29
SOX1O00570 ATP5F1P7-201ENST00000567330 760 ntBASIC7.01□□□□□ -1.29
SOX1O00570 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC7.01□□□□□ -1.29
SOX1O00570 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC7.01□□□□□ -1.29
SOX1O00570 Mico1.1-201ENST00000611698 204 ntBASIC7.01□□□□□ -1.29
SOX1O00570 AL589743.7-201ENST00000612637 233 ntBASIC7.01□□□□□ -1.29
SOX1O00570 AC116618.1-201ENST00000634617 774 ntBASIC7.01□□□□□ -1.29
SOX1O00570 AF001550.2-201ENST00000636643 217 ntBASIC7.01□□□□□ -1.29
SOX1O00570 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SOX1O00570 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC7.01□□□□□ -1.29
SOX1O00570 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SOX1O00570 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
SOX1O00570 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC7.01□□□□□ -1.29
SOX1O00570 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SOX1O00570 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SOX1O00570 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SOX1O00570 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SOX1O00570 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
SOX1O00570 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SOX1O00570 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.01□□□□□ -1.29
SOX1O00570 VN2R3P-201ENST00000422626 1412 ntBASIC7.01□□□□□ -1.29
SOX1O00570 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
SOX1O00570 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
SOX1O00570 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SOX1O00570 MRRFP1-201ENST00000435941 1675 ntBASIC7□□□□□ -1.29
SOX1O00570 AC138627.1-203ENST00000641872 1680 ntBASIC7□□□□□ -1.29
SOX1O00570 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7□□□□□ -1.29
SOX1O00570 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7□□□□□ -1.29
SOX1O00570 OR4Q2-201ENST00000541415 2778 ntAPPRIS P5 BASIC7□□□□□ -1.29
SOX1O00570 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
SOX1O00570 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7□□□□□ -1.29
SOX1O00570 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC7□□□□□ -1.29
SOX1O00570 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SOX1O00570 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC7□□□□□ -1.29
SOX1O00570 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7□□□□□ -1.29
SOX1O00570 FGF7P2-201ENST00000332473 296 ntBASIC7□□□□□ -1.29
SOX1O00570 Y_RNA.18-201ENST00000362461 102 ntBASIC7□□□□□ -1.29
SOX1O00570 RN7SKP103-201ENST00000363848 320 ntBASIC7□□□□□ -1.29
SOX1O00570 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC7□□□□□ -1.29
SOX1O00570 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC7□□□□□ -1.29
SOX1O00570 LINC01347-201ENST00000417964 355 ntBASIC7□□□□□ -1.29
SOX1O00570 AC245054.1-201ENST00000420944 258 ntBASIC7□□□□□ -1.29
SOX1O00570 AL109913.1-201ENST00000421173 514 ntBASIC7□□□□□ -1.29
SOX1O00570 VDAC1P2-201ENST00000423609 850 ntBASIC7□□□□□ -1.29
SOX1O00570 OR5W1P-201ENST00000423705 938 ntBASIC7□□□□□ -1.29
SOX1O00570 FO393419.3-201ENST00000428741 282 ntBASIC7□□□□□ -1.29
SOX1O00570 FABP7P2-201ENST00000429946 379 ntBASIC7□□□□□ -1.29
SOX1O00570 VDAC1P6-201ENST00000430062 855 ntBASIC7□□□□□ -1.29
SOX1O00570 USP12PX-201ENST00000432383 1057 ntBASIC7□□□□□ -1.29
SOX1O00570 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7□□□□□ -1.29
SOX1O00570 AL450996.1-201ENST00000445574 1202 ntBASIC7□□□□□ -1.29
SOX1O00570 MTND3P10-201ENST00000450967 341 ntBASIC7□□□□□ -1.29
SOX1O00570 AL445665.1-202ENST00000452436 324 ntBASIC7□□□□□ -1.29
SOX1O00570 DNAJC19P1-201ENST00000455312 319 ntBASIC7□□□□□ -1.29
SOX1O00570 PTMAP1-205ENST00000455552 325 ntBASIC7□□□□□ -1.29
SOX1O00570 AMD1P1-201ENST00000457220 922 ntBASIC7□□□□□ -1.29
SOX1O00570 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC7□□□□□ -1.29
SOX1O00570 PFN2-217ENST00000498307 556 ntTSL 4 BASIC7□□□□□ -1.29
SOX1O00570 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC7□□□□□ -1.29
SOX1O00570 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC7□□□□□ -1.29
SOX1O00570 SCARNA5-201ENST00000516201 276 ntBASIC7□□□□□ -1.29
SOX1O00570 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC7□□□□□ -1.29
SOX1O00570 DEFB108A-201ENST00000530110 222 ntBASIC7□□□□□ -1.29
SOX1O00570 AC004825.1-201ENST00000555068 586 ntBASIC7□□□□□ -1.29
SOX1O00570 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC7□□□□□ -1.29
SOX1O00570 EIF5A2P1-201ENST00000564027 460 ntBASIC7□□□□□ -1.29
SOX1O00570 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC7□□□□□ -1.29
SOX1O00570 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7□□□□□ -1.29
SOX1O00570 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC7□□□□□ -1.29
SOX1O00570 FGF7P1-201ENST00000582820 288 ntBASIC7□□□□□ -1.29
SOX1O00570 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC7□□□□□ -1.29
SOX1O00570 AL512652.1-201ENST00000619006 500 ntBASIC7□□□□□ -1.29
SOX1O00570 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC7□□□□□ -1.29
SOX1O00570 AC004009.2-201ENST00000623016 728 ntBASIC7□□□□□ -1.29
SOX1O00570 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
SOX1O00570 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7□□□□□ -1.29
SOX1O00570 AP003175.1-201ENST00000641383 6658 ntBASIC7□□□□□ -1.29
SOX1O00570 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7□□□□□ -1.29
SOX1O00570 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
SOX1O00570 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC7□□□□□ -1.29
SOX1O00570 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SOX1O00570 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7□□□□□ -1.29
SOX1O00570 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
SOX1O00570 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7□□□□□ -1.29
SOX1O00570 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
SOX1O00570 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SOX1O00570 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SOX1O00570 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
SOX1O00570 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC6.99□□□□□ -1.29
SOX1O00570 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SOX1O00570 AC008627.1-201ENST00000517511 1704 ntBASIC6.99□□□□□ -1.29
SOX1O00570 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
SOX1O00570 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC6.99□□□□□ -1.29
SOX1O00570 OR13C1P-202ENST00000641378 2919 ntBASIC6.99□□□□□ -1.29
SOX1O00570 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.99□□□□□ -1.29
SOX1O00570 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
SOX1O00570 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms