Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC2.54□□□□□ -2
LINC01558Q9Y6Z2 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 RPS4XP5-202ENST00000449995 1334 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 XIAPP3-201ENST00000312918 795 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 OR56B2P-201ENST00000317102 954 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 SH3BGR-204ENST00000380637 1014 ntTSL 3 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 HIST1H3PS1-201ENST00000404612 417 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AL080315.1-201ENST00000406055 466 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 HYKK-202ENST00000408962 847 ntTSL 5 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 RNA5SP306-201ENST00000411087 107 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 UBTFL3-201ENST00000418934 1024 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 Z74021.1-201ENST00000423610 407 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 CENPIP1-201ENST00000425713 902 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC073335.1-201ENST00000427776 363 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AP001595.1-201ENST00000435878 516 ntTSL 2 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC002553.1-201ENST00000442828 802 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC083939.1-201ENST00000445475 126 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 UBTFL6-201ENST00000477929 1024 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 RPL5P33-201ENST00000487833 905 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 RN7SL350P-201ENST00000492591 299 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 CBX1-205ENST00000495350 550 ntTSL 2 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 B3GNTL1P1-201ENST00000509174 289 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 RN7SKP196-201ENST00000516267 345 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC067735.1-201ENST00000551152 526 ntTSL 2 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AL512310.9-201ENST00000553311 948 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC009997.1-201ENST00000557862 129 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC124068.1-201ENST00000563131 678 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 HYKK-203ENST00000563233 734 ntTSL 2 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC010650.1-201ENST00000567559 494 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC011487.3-201ENST00000593607 453 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 RPS11-205ENST00000599561 430 ntTSL 5 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 BNIP3P35-201ENST00000604530 490 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 IGKV2OR2-2-201ENST00000605025 300 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 SMARCE1P7-201ENST00000605515 485 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 RN7SL722P-201ENST00000617780 284 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 RN7SL565P-201ENST00000618246 284 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC015804.1-201ENST00000622935 435 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AP002505.2-201ENST00000623585 696 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC106733.1-201ENST00000624476 1038 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 OR8G3P-202ENST00000641572 1255 ntBASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.53□□□□□ -2
LINC01558Q9Y6Z2 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2.01
LINC01558Q9Y6Z2 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC2.53□□□□□ -2.01
LINC01558Q9Y6Z2 AC009951.1-201ENST00000623674 2614 ntBASIC2.53□□□□□ -2.01
LINC01558Q9Y6Z2 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC2.53□□□□□ -2.01
LINC01558Q9Y6Z2 PANDAR-201ENST00000629595 1506 ntBASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LINC01558Q9Y6Z2 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms