Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 AP001029.2-203ENST00000589795 4910 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 RNU1-19P-201ENST00000363306 165 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 RNU6-819P-201ENST00000364116 107 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 RNA5SP339-201ENST00000390987 122 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 RNA5SP241-201ENST00000391326 114 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 HSPA8P15-201ENST00000401676 786 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 RNA5SP487-201ENST00000410186 122 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 GNG5P5-201ENST00000420444 220 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 AJ239321.1-201ENST00000424255 564 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 HMGN2P27-201ENST00000427352 270 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 AC124944.2-201ENST00000429866 1242 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 FTLP19-201ENST00000433300 394 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 Z85994.2-201ENST00000434327 452 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 GAPDHP14-201ENST00000450472 937 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 AC104634.1-201ENST00000452720 462 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 AP000797.2-201ENST00000475768 606 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 OR2AO1P-201ENST00000476497 403 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 RN7SL447P-201ENST00000494711 245 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 RNA5SP373-201ENST00000517271 95 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 AC138832.1-201ENST00000522871 556 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 RPL10P14-201ENST00000565265 298 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 MIR6837-201ENST00000620884 64 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 AC136428.4-201ENST00000634254 1155 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 CASC19-264ENST00000641912 1184 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 AL356317.1-201ENST00000396110 1436 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 AC087565.3-202ENST00000642085 1603 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 RLIMP2-201ENST00000427891 1563 ntBASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 SNORA5.1-201ENST00000384275 131 ntBASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 AC244453.4-201ENST00000419150 388 ntBASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 ARAFP1-201ENST00000422172 605 ntBASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 AL355433.1-201ENST00000422804 300 ntBASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 RPL19P16-201ENST00000433839 588 ntBASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 C1DP3-201ENST00000455013 423 ntBASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 COPS8P2-201ENST00000473228 627 ntBASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 CBX1P5-201ENST00000475330 559 ntBASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 UBA52P7-201ENST00000486088 380 ntBASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 RPS12P31-201ENST00000491419 398 ntBASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 RNU6-941P-201ENST00000516346 108 ntBASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 SNORA70.17-201ENST00000516449 133 ntBASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 FTH1P11-201ENST00000517577 551 ntBASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 AC009852.2-201ENST00000567898 485 ntBASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 RN7SL290P-201ENST00000578661 300 ntBASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.03□□□□□ -1.6
ATG4BQ9Y4P1 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms