Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 AC022832.1-201ENST00000530718 645 ntBASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 AC137627.1-201ENST00000545761 289 ntBASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 MTND2P17-201ENST00000550281 688 ntBASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 AL136520.1-202ENST00000555494 763 ntBASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 AC011493.1-201ENST00000596753 1632 ntBASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 NANOGP3-201ENST00000605855 286 ntBASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 AL136295.6-201ENST00000610486 658 ntBASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 AP005432.1-201ENST00000580891 3485 ntBASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 AC006206.1-201ENST00000544842 3387 ntBASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.12□□□□□ -1.43
HDAC6Q9UBN7 AC068870.1-201ENST00000563737 2455 ntBASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 AC087565.3-202ENST00000642085 1603 ntBASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 RNU6-697P-201ENST00000363348 107 ntBASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 RNU1-106P-201ENST00000384382 164 ntBASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 MIR585-201ENST00000384887 94 ntBASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 AL133482.1-201ENST00000415988 498 ntBASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 AC007161.1-204ENST00000423039 460 ntBASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 SRSF1P1-201ENST00000424058 520 ntBASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 RPL5P25-201ENST00000441148 775 ntBASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 SETP12-201ENST00000514068 805 ntBASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 RNU6-941P-201ENST00000516346 108 ntBASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 MTND1P36-201ENST00000522384 936 ntBASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 EIF4A2P5-201ENST00000529914 499 ntBASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 AC019322.1-201ENST00000571869 389 ntBASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 AC087763.1-201ENST00000603391 286 ntBASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 AC109583.2-201ENST00000617367 129 ntBASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 AL138960.2-201ENST00000625145 535 ntBASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 HSPA8P14-201ENST00000552265 1805 ntBASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
HDAC6Q9UBN7 BCORP1-203ENST00000513194 5093 ntBASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 PROS2P-201ENST00000474651 1951 ntBASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 RNA5SP326-201ENST00000363209 110 ntBASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 RNU1-43P-201ENST00000365052 165 ntBASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 SNORA67-201ENST00000384423 137 ntBASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 VTI1BP4-201ENST00000427516 527 ntBASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 PSMD10P3-201ENST00000437000 448 ntBASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 AL606490.8-201ENST00000441624 319 ntBASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 SUMO2P1-206ENST00000445436 284 ntBASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 HMGB1P40-201ENST00000525121 540 ntBASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 AC005000.1-201ENST00000536192 288 ntBASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 AC027281.1-201ENST00000574178 758 ntBASIC6.1□□□□□ -1.43
HDAC6Q9UBN7 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms