Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 CLUHP1-201ENST00000435012 1190 ntBASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 PSMD10P3-201ENST00000437000 448 ntBASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 RPL12P3-201ENST00000440080 396 ntBASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 AC023271.1-201ENST00000445936 1090 ntBASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 DNAJB5P1-201ENST00000454004 806 ntBASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 TAAR4P-201ENST00000454843 1039 ntBASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 AC097484.1-201ENST00000471148 389 ntBASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 AC022133.1-201ENST00000490961 571 ntBASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 AP000676.2-201ENST00000529711 301 ntBASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 MIR4646-201ENST00000580775 63 ntBASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 AC010632.3-201ENST00000611377 369 ntBASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 AC090510.2-201ENST00000617465 629 ntBASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 AL353684.1-201ENST00000622677 1120 ntBASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
CLCF1Q9UBD9 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 RNU4-4P-201ENST00000364588 130 ntBASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 SNORA70.6-201ENST00000383934 134 ntBASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 AL109941.1-201ENST00000401925 229 ntBASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 NACAP7-201ENST00000407371 609 ntBASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 AL158827.1-201ENST00000416300 391 ntBASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 AC093162.1-201ENST00000419682 124 ntBASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 TRGV7-201ENST00000427089 353 ntBASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 AL161722.2-201ENST00000434731 981 ntBASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 RPL12P18-201ENST00000437175 325 ntBASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 RPS29P10-201ENST00000439197 166 ntBASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 SBDSP1-204ENST00000453858 737 ntBASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 RPL7P41-201ENST00000485823 957 ntBASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 RN7SL97P-201ENST00000486780 299 ntBASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 MTCO3P42-201ENST00000509488 518 ntBASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 AC004980.4-201ENST00000513375 203 ntBASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 MTCO3P39-201ENST00000514812 518 ntBASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 RN7SKP147-201ENST00000517154 244 ntBASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 AC020937.1-201ENST00000519677 1013 ntBASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 BNIP3P32-201ENST00000600015 554 ntBASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 CASC19-281ENST00000642118 1554 ntBASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CLCF1Q9UBD9 THAP12P4-201ENST00000528321 2266 ntBASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 AC112255.1-201ENST00000624070 2493 ntBASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 RN7SKP145-201ENST00000363291 303 ntBASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.63□□□□□ -1.67
CLCF1Q9UBD9 MIR589-201ENST00000385238 99 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms