Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 HSPA8P15-201ENST00000401676 786 ntBASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AL390316.1-201ENST00000406279 553 ntBASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 U3.32-201ENST00000408116 212 ntBASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 MIR1275-201ENST00000408770 80 ntBASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 RNA5SP146-201ENST00000410743 123 ntBASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 RANP7-201ENST00000418085 644 ntBASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 TMX2P1-201ENST00000436507 708 ntBASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AC019185.1-201ENST00000442718 389 ntBASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 RPL7AP61-201ENST00000443410 636 ntBASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AC002553.2-201ENST00000453217 340 ntBASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AC044810.1-201ENST00000480271 711 ntBASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AC060775.1-201ENST00000518241 520 ntBASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AC078878.1-201ENST00000539832 958 ntBASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AC006512.2-201ENST00000543250 486 ntBASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AC026826.3-201ENST00000561747 158 ntBASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AC234775.3-201ENST00000564612 656 ntBASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AC005479.3-201ENST00000602790 431 ntBASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 HTR1DP1-201ENST00000616500 888 ntBASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AC118658.2-201ENST00000618697 459 ntBASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC28BQ9BUN5 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 MTHFD2P5-201ENST00000320415 844 ntBASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 RNU1-94P-201ENST00000362627 173 ntBASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 AC004386.1-201ENST00000393214 761 ntBASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 AL035079.1-201ENST00000405210 287 ntBASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 FABP7P2-201ENST00000429946 379 ntBASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 AC097523.2-201ENST00000435551 652 ntBASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 RPL7AP28-201ENST00000464513 571 ntBASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 MTND3P6-201ENST00000485242 339 ntBASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 AC021146.3-201ENST00000511911 260 ntBASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 AC125612.1-201ENST00000547580 377 ntBASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 AC132825.8-201ENST00000640783 297 ntBASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 AC106872.5-201ENST00000508856 1416 ntBASIC5.06□□□□□ -1.6
CCDC28BQ9BUN5 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms