Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC42Q96M95 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CCDC42Q96M95 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC42Q96M95 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC42Q96M95 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC42Q96M95 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CCDC42Q96M95 MIR600-201ENST00000385007 98 ntBASIC5.44□□□□□ -1.54
CCDC42Q96M95 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC42Q96M95 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC42Q96M95 RPL36AP10-201ENST00000421785 322 ntBASIC5.44□□□□□ -1.54
CCDC42Q96M95 NPM1P22-201ENST00000427761 952 ntBASIC5.44□□□□□ -1.54
CCDC42Q96M95 RPL34P6-201ENST00000432390 345 ntBASIC5.44□□□□□ -1.54
CCDC42Q96M95 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC42Q96M95 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC42Q96M95 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC42Q96M95 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC42Q96M95 RN7SL547P-201ENST00000490793 290 ntBASIC5.44□□□□□ -1.54
CCDC42Q96M95 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.44□□□□□ -1.54
CCDC42Q96M95 RN7SL591P-201ENST00000496150 292 ntBASIC5.44□□□□□ -1.54
CCDC42Q96M95 ENPP7P9-201ENST00000514456 627 ntBASIC5.44□□□□□ -1.54
CCDC42Q96M95 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC42Q96M95 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC42Q96M95 HNRNPRP2-201ENST00000528421 743 ntBASIC5.44□□□□□ -1.54
CCDC42Q96M95 AC005868.1-201ENST00000536421 331 ntBASIC5.44□□□□□ -1.54
CCDC42Q96M95 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC42Q96M95 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC42Q96M95 AL049830.4-201ENST00000555149 351 ntBASIC5.44□□□□□ -1.54
CCDC42Q96M95 AC022404.1-201ENST00000555320 273 ntBASIC5.44□□□□□ -1.54
CCDC42Q96M95 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC42Q96M95 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.44□□□□□ -1.54
CCDC42Q96M95 AC069307.1-201ENST00000602820 447 ntBASIC5.44□□□□□ -1.54
CCDC42Q96M95 AC104695.2-201ENST00000605056 775 ntBASIC5.44□□□□□ -1.54
CCDC42Q96M95 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.44□□□□□ -1.54
CCDC42Q96M95 AL359742.1-201ENST00000622497 540 ntBASIC5.44□□□□□ -1.54
CCDC42Q96M95 AC107068.1-201ENST00000563286 4218 ntBASIC5.44□□□□□ -1.54
CCDC42Q96M95 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC42Q96M95 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC42Q96M95 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC42Q96M95 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC42Q96M95 AC068446.1-201ENST00000556425 1549 ntBASIC5.43□□□□□ -1.54
CCDC42Q96M95 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC42Q96M95 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC42Q96M95 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC42Q96M95 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CCDC42Q96M95 RNU6-249P-201ENST00000363016 102 ntBASIC5.43□□□□□ -1.54
CCDC42Q96M95 SNORA67-201ENST00000384423 137 ntBASIC5.43□□□□□ -1.54
CCDC42Q96M95 RN7SKP286-201ENST00000410894 299 ntBASIC5.43□□□□□ -1.54
CCDC42Q96M95 RN7SKP97-201ENST00000410966 333 ntBASIC5.43□□□□□ -1.54
CCDC42Q96M95 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
CCDC42Q96M95 AL389925.1-201ENST00000432257 728 ntBASIC5.43□□□□□ -1.54
CCDC42Q96M95 AL031584.1-201ENST00000447169 754 ntBASIC5.43□□□□□ -1.54
CCDC42Q96M95 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC42Q96M95 AL591473.1-201ENST00000464297 313 ntBASIC5.43□□□□□ -1.54
CCDC42Q96M95 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC42Q96M95 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC42Q96M95 RN7SL466P-201ENST00000497546 295 ntBASIC5.43□□□□□ -1.54
CCDC42Q96M95 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC42Q96M95 SUMO2P4-201ENST00000504193 276 ntBASIC5.43□□□□□ -1.54
CCDC42Q96M95 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC42Q96M95 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.43□□□□□ -1.54
CCDC42Q96M95 RPSAP73-201ENST00000614820 330 ntBASIC5.43□□□□□ -1.54
CCDC42Q96M95 AC015871.5-202ENST00000623252 701 ntBASIC5.43□□□□□ -1.54
CCDC42Q96M95 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC42Q96M95 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC42Q96M95 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC42Q96M95 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CCDC42Q96M95 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC42Q96M95 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC42Q96M95 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC42Q96M95 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC42Q96M95 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
CCDC42Q96M95 AP001642.1-201ENST00000624727 2117 ntBASIC5.42□□□□□ -1.54
CCDC42Q96M95 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CCDC42Q96M95 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC42Q96M95 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
CCDC42Q96M95 AC099535.1-201ENST00000408928 371 ntBASIC5.42□□□□□ -1.54
CCDC42Q96M95 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC42Q96M95 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.42□□□□□ -1.54
CCDC42Q96M95 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC42Q96M95 TMBIM7P-201ENST00000418074 855 ntBASIC5.42□□□□□ -1.54
CCDC42Q96M95 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC42Q96M95 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC42Q96M95 AL450023.3-201ENST00000440592 271 ntBASIC5.42□□□□□ -1.54
CCDC42Q96M95 PCNPP2-201ENST00000441651 455 ntBASIC5.42□□□□□ -1.54
CCDC42Q96M95 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC42Q96M95 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC42Q96M95 RPL31P15-201ENST00000449770 338 ntBASIC5.42□□□□□ -1.54
CCDC42Q96M95 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC42Q96M95 RPS27AP2-201ENST00000457576 465 ntBASIC5.42□□□□□ -1.54
CCDC42Q96M95 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CCDC42Q96M95 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC42Q96M95 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC42Q96M95 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC42Q96M95 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.42□□□□□ -1.54
CCDC42Q96M95 AC138938.1-201ENST00000515431 782 ntBASIC5.42□□□□□ -1.54
CCDC42Q96M95 RN7SKP70-201ENST00000516655 271 ntBASIC5.42□□□□□ -1.54
CCDC42Q96M95 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC42Q96M95 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC42Q96M95 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CCDC42Q96M95 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms